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The ubiquitin thioesterase YOD1 ameliorates mutant Huntingtin induced pathology in Drosophila
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Huntington’s disease (HD) is a neurodegenerative disorder caused by a dominant gain-of-function mutation in the huntingtin gene, resulting in an elongated polyglutamine repeat in the mutant Huntingtin (mHtt) that mediates aberrant protein interactions. Previous studies implicated the ubiquitin–proteasome system in HD, suggesting that restoring cellular proteostasis might be a key element in suppressing pathology. We applied genetic interaction tests in a Drosophila model to ask whether modulating the levels of deubiquitinase enzymes affect HD pathology. By testing 32 deubiquitinase genes we found that overexpression of Yod1 ameliorated all analyzed phenotypes, including neurodegeneration, motor activity, viability, and longevity. Yod1 did not have a similar effect in amyloid beta overexpressing flies, suggesting that the observed effects might be specific to mHtt. Yod1 overexpression did not alter the number of mHtt aggregates but moderately increased the ratio of larger aggregates. Transcriptome analysis showed that Yod1 suppressed the transcriptional effects of mHtt and restored the expression of genes involved in neuronal plasticity, vesicular transport, antimicrobial defense, and protein synthesis, modifications, and clearance. Furthermore, Yod1 overexpression in HD flies leads to the upregulation of genes involved in transcriptional regulation and synaptic transmission, which might be part of a response mechanism to mHtt-induced stress.
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Biokémiai és Molekuláris Biológiai Tanszék (SZTE / TTIK / BI); Biológia Doktori Iskola (SZTE / DI); Genetikai Tanszék (SZTE / TTIK / BI)
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<div class="JournalArticle Publication short-list"> <div class="authors"> <span class="author-name" mtid="10034386"> <a href="/gui2/?type=authors&mode=browse&sel=10034386" target="_blank">Farkas, Anita</a> </span> <span class="author-type"> </span> ; <span class="author-name" mtid="10019404"> <a href="/gui2/?type=authors&mode=browse&sel=10019404" target="_blank">Zsindely, Nóra</a> </span> <span class="author-type"> </span> ; <span class="author-name" mtid="10077384"> <a href="/gui2/?type=authors&mode=browse&sel=10077384" target="_blank">Nagy, Gábor</a> </span> <span class="author-type"> </span> ; <span class="author-name" mtid="10030929"> <a href="/gui2/?type=authors&mode=browse&sel=10030929" target="_blank">Kovács, Levente</a> </span> <span class="author-type"> </span> ; <span class="author-name" mtid="10010808"> <a href="/gui2/?type=authors&mode=browse&sel=10010808" target="_blank">Deák, Péter</a> </span> <span class="author-type"> </span> ; <span class="author-name" mtid="10019011"> <a href="/gui2/?type=authors&mode=browse&sel=10019011" target="_blank">Bodai, László ✉</a> </span> <span class="author-type"> </span> </div ><div class="title"><a href="/gui2/?mode=browse¶ms=publication;34431874" mtid="34431874" target="_blank">The ubiquitin thioesterase YOD1 ameliorates mutant Huntingtin induced pathology in Drosophila</a></div> <div class="pub-info"> <span class="journal-title">SCIENTIFIC REPORTS</span> <span class="journal-volume">13</span> : <span class="journal-issue">1</span> <span class="page"> Paper: 21951 , 13 p. </span> <span class="year">(2023)</span> </div> <div class="pub-end"><div class="identifier-list"> <span class="identifiers"> <span class="id identifier oa_GOLD" title=" Gold "> <a style="color:blue" title="10.1038/s41598-023-49241-8" target="_blank" href="https://doi.org/10.1038/s41598-023-49241-8"> DOI </a> </span> <span class="id identifier oa_none" title="none"> <a style="color:blue" title="001127268500081" target="_blank" href="https://www.webofscience.com/wos/woscc/full-record/001127268500081"> WoS </a> </span> <span class="id identifier oa_none" title="none"> <a style="color:blue" title="85179354441" target="_blank" href="http://www.scopus.com/record/display.url?origin=inward&eid=2-s2.0-85179354441"> Scopus </a> </span> <span class="id identifier oa_none" title="none"> <a style="color:blue" title="38081944" target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=38081944&dopt=Abstract"> PubMed </a> </span> <span class="id identifier oa_none" title="none"> <a style="color:black" title="https://www.nature.com/articles/s41598-023-49241-8" target="_blank" href="https://www.nature.com/articles/s41598-023-49241-8"> Egyéb URL </a> </span> <span class="id identifier oa_GREEN" title=" Green "> <a style="color:blue" title="29632" target="_blank" href="http://publicatio.bibl.u-szeged.hu/29632"> SZTE Publicatio </a> </span> </span> </div> <div class="short-pub-prop-list"> <span class="short-pub-mtid"> Közlemény:34431874 </span> <span class="status-holder"><span class="status-data status-VALIDATED"> Egyeztetett </span></span> <span class="pub-core">Forrás Idéző </span> <span class="pub-type">Folyóiratcikk (Szakcikk ) </span> <!-- && !record.category.scientific --> <span class="pub-category">Tudományos</span> </div> </div> </div><div class="JournalArticle Publication long-list"> <div class="authors"> <img title="Forrásközlemény" style="float: left" src="/frontend/resources/grid/publication-core-icon.png"> <img title="Idézőközlemény" style="float: left" src="/frontend/resources/grid/publication-citation-icon.png"> <div class="autype autype0"> <span class="author-name" mtid="10034386"><a href="/gui2/?type=authors&mode=browse&sel=10034386" target="_blank">Farkas Anita (<span class="authorship-author-name">Farkas Anita</span> <span class="authorAux-mtmt"> Mikrobiológia</span>) </a> </span> <span class="author-affil"><span title="Szegedi Tudományegyetem">SZTE</span>/<span title="Doktori Iskolák">DI</span>/Biológia Doktori Iskola; <span title="Szegedi Tudományegyetem">SZTE</span>/<span title="Természettudományi és Informatikai Kar">TTIK</span>/<span title="Biológia Intézet">BI</span>/Biokémiai és Molekuláris Biológiai Tanszék</span> ; <span class="author-name" mtid="10019404"><a href="/gui2/?type=authors&mode=browse&sel=10019404" target="_blank">Zsindely Nóra (<span class="authorship-author-name">Zsindely Nóra</span> <span class="authorAux-mtmt"> Molekuláris biológia</span>) </a> </span> <span class="author-affil"><span title="Szegedi Tudományegyetem">SZTE</span>/<span title="Természettudományi és Informatikai Kar">TTIK</span>/<span title="Biológia Intézet">BI</span>/Biokémiai és Molekuláris Biológiai Tanszék; <span title="Szegedi Tudományegyetem">SZTE</span>/<span title="Természettudományi és Informatikai Kar">TTIK</span>/<span title="Biológia Intézet">BI</span>/Genetikai Tanszék</span> ; <span class="author-name" mtid="10077384"><a href="/gui2/?type=authors&mode=browse&sel=10077384" target="_blank">Nagy Gábor (<span class="authorship-author-name">Nagy Gábor</span> <span class="authorAux-mtmt"> bioinformatika</span>) </a> </span> <span class="author-affil"><span title="Szegedi Tudományegyetem">SZTE</span>/<span title="Természettudományi és Informatikai Kar">TTIK</span>/<span title="Biológia Intézet">BI</span>/Biokémiai és Molekuláris Biológiai Tanszék</span> ; <span class="author-name" mtid="10030929"><a href="/gui2/?type=authors&mode=browse&sel=10030929" target="_blank">Kovács Levente (<span class="authorship-author-name">Kovács Levente</span> <span class="authorAux-mtmt"> biokémia</span>) </a> </span> <span class="author-affil"><span title="Szegedi Tudományegyetem">SZTE</span>/<span title="Természettudományi és Informatikai Kar">TTIK</span>/<span title="Biológia Intézet">BI</span>/Genetikai Tanszék</span> ; <span class="author-name" mtid="10010808"><a href="/gui2/?type=authors&mode=browse&sel=10010808" target="_blank">Deák Péter (<span class="authorship-author-name">Deák Péter</span> <span class="authorAux-mtmt"> genetika</span>) </a> </span> <span class="author-affil"><span title="Szegedi Tudományegyetem">SZTE</span>/<span title="Természettudományi és Informatikai Kar">TTIK</span>/<span title="Biológia Intézet">BI</span>/Genetikai Tanszék</span> ; <span class="author-name" mtid="10019011"><a href="/gui2/?type=authors&mode=browse&sel=10019011" target="_blank">Bodai László ✉ (<span class="authorship-author-name">Bodai László</span> <span class="authorAux-mtmt"> Molekuláris biológia, epigenetika</span>) </a> </span> <span class="author-affil"><span title="Szegedi Tudományegyetem">SZTE</span>/<span title="Természettudományi és Informatikai Kar">TTIK</span>/<span title="Biológia Intézet">BI</span>/Biokémiai és Molekuláris Biológiai Tanszék</span> </div> </div> <div class="title"><a href="/gui2/?mode=browse¶ms=publication;34431874" target="_blank">The ubiquitin thioesterase YOD1 ameliorates mutant Huntingtin induced pathology in Drosophila</a></div> <div> <span class="journal-title">SCIENTIFIC REPORTS</span> <span class="journal-issn">(<a target="_blank" href="https://portal.issn.org/resource/ISSN/2045-2322">2045-2322</a> <a target="_blank" href="https://portal.issn.org/resource/ISSN/2045-2322">2045-2322</a>)</span>: <span class="journal-volume">13</span> <span class="journal-issue">1</span> <span class="page"> Paper 21951. 13 p. </span> <span class="year">(2023)</span> </div> <div class="pub-footer"> <span class="language" xmlns="http://www.w3.org/1999/html">Nyelv: Angol | </span> <span class="identifiers"> <span class="id identifier oa_GOLD" title=" Gold "> <a style="color:blue" title="10.1038/s41598-023-49241-8" target="_blank" href="https://doi.org/10.1038/s41598-023-49241-8"> DOI </a> </span> <span class="id identifier oa_none" title="none"> <a style="color:blue" title="001127268500081" target="_blank" href="https://www.webofscience.com/wos/woscc/full-record/001127268500081"> WoS </a> </span> <span class="id identifier oa_none" title="none"> <a style="color:blue" title="85179354441" target="_blank" href="http://www.scopus.com/record/display.url?origin=inward&eid=2-s2.0-85179354441"> Scopus </a> </span> <span class="id identifier oa_none" title="none"> <a style="color:blue" title="38081944" target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=38081944&dopt=Abstract"> PubMed </a> </span> <span class="id identifier oa_none" title="none"> <a style="color:black" title="https://www.nature.com/articles/s41598-023-49241-8" target="_blank" href="https://www.nature.com/articles/s41598-023-49241-8"> Egyéb URL </a> </span> <span class="id identifier oa_GREEN" title=" Green "> <a style="color:blue" title="29632" target="_blank" href="http://publicatio.bibl.u-szeged.hu/29632"> SZTE Publicatio </a> </span> </span> <div class="publication-citation"> <a target="_blank" href="/api/publication?cond=citations.related;eq;34431874&sort=publishedYear,desc&sort=title"> Idézett közlemények száma: 3 </a> </div> <div class="mtid"><span class="long-pub-mtid">Közlemény: 34431874</span> | <span class="status-data status-VALIDATED"> Egyeztetett </span> Forrás Idéző | <span class="type-subtype">Folyóiratcikk ( Szakcikk ) </span> | <span class="pub-category">Tudományos</span> | <span class="publication-sourceOfData">kézi felvitel</span> </div> <div class="lastModified">Utolsó módosítás: 2024.03.20. 14:46 Belházyné Szombathelyi Ágnes (SZTE admin5) </div> </div></div>
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Funding Agency and Grant Number: Taiwan National Science and Technology Council [MOST111-2311-B-001-018-MY3]; Academia Sinica
Funding text: We thank Jui-Chou Hsu, Thomas Neufeld, the Bloomington Stock Center, Vienna Drosophila RNAi Center, and Fly Core Taiwan for reagents and fly stocks; the National RNAi Core Facility (Academia Sinica, Taiwan) for shRNAs. We thank Hong-Ru Lin for the initiation of the genetic screen. We are grateful to members of the Chen laboratory for helpful discussions during the course of this work. This work was supported by the Taiwan National Science and Technology Council (MOST111-2311-B-001-018-MY3) and by Academia Sinica.
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Accumulating evidence has shown that the quality of proteins must be tightly monitored and controlled to maintain cellular proteostasis. Misfolded proteins and protein aggregates are targeted for degradation through the ubiquitin proteasome (UPS) and autophagy-lysosome systems. The ubiquitination and deubiquitinating enzymes (DUBs) have been reported to play pivotal roles in the regulation of the UPS system. However, the function of DUBs in the regulation of autophagy remain to be elucidated. In this study, we found that knockdown of Leon/USP5 caused a marked increase in the formation of autophagosomes and autophagic flux under well-fed conditions. Genetic analysis revealed that overexpression of Leon suppressed Atg1-induced cell death in Drosophila. Immunoblotting assays further showed a strong interaction between Leon/USP5 and the autophagy initiating kinase Atg1/ULK1. Depletion of Leon/USP5 led to increased levels of Atg1/ULK1. Our findings indicate that Leon/USP5 is an autophagic DUB that interacts with Atg1/ULK1, negatively regulating the autophagic process.
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<div class="JournalArticle Publication short-list"> <div class="authors"> <span class="author-name" > Pai, Yueh-Ling </span> <span class="author-type"> </span> ; <span class="author-name" > Lin, Yuchieh Jay </span> <span class="author-type"> </span> ; <span class="author-name" > Peng, Wen-Hsin </span> <span class="author-type"> </span> ; <span class="author-name" > Huang, Li-Ting </span> <span class="author-type"> </span> ; <span class="author-name" > Chou, He-Yen </span> <span class="author-type"> </span> ; <span class="author-name" > Wang, Chien-Hsiang </span> <span class="author-type"> </span> ; <span class="author-name" > Chien, Cheng-Ting </span> <span class="author-type"> </span> ; <span class="author-name" > Chen, Guang-Chao ✉ </span> <span class="author-type"> </span> </div ><div class="title"><a href="/gui2/?mode=browse¶ms=publication;34131249" mtid="34131249" target="_blank">The deubiquitinase Leon/USP5 interacts with Atg1/ULK1 and antagonizes autophagy</a></div> <div class="pub-info"> <span class="journal-title">CELL DEATH AND DISEASE</span> <span class="journal-volume">14</span> : <span class="journal-issue">8</span> <span class="page"> Paper: 540 , 11 p. </span> <span class="year">(2023)</span> </div> <div class="pub-end"><div class="identifier-list"> <span class="identifiers"> <span class="id identifier oa_none" title="none"> <a style="color:blue" title="10.1038/s41419-023-06062-x" target="_blank" href="https://doi.org/10.1038/s41419-023-06062-x"> DOI </a> </span> <span class="id identifier oa_none" title="none"> <a style="color:blue" title="001052548900002" target="_blank" href="https://www.webofscience.com/wos/woscc/full-record/001052548900002"> WoS </a> </span> <span class="id identifier oa_none" title="none"> <a style="color:blue" title="85168525115" target="_blank" href="http://www.scopus.com/record/display.url?origin=inward&eid=2-s2.0-85168525115"> Scopus </a> </span> <span class="id identifier oa_none" title="none"> <a style="color:blue" title="37607937" target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=37607937&dopt=Abstract"> PubMed </a> </span> </span> </div> <div class="short-pub-prop-list"> <span class="short-pub-mtid"> Közlemény:34131249 </span> <span class="status-holder"><span class="status-data status-VALIDATED"> Egyeztetett </span></span> <span class="pub-core"> Idéző </span> <span class="pub-type">Folyóiratcikk (Szakcikk ) </span> <!-- && !record.category.scientific --> <span class="pub-category">Tudományos</span> </div> </div> </div><div class="JournalArticle Publication long-list">
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;
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;
<span class="author-name" >Peng Wen-Hsin
</span>
;
<span class="author-name" >Huang Li-Ting
</span>
;
<span class="author-name" >Chou He-Yen
</span>
;
<span class="author-name" >Wang Chien-Hsiang
</span>
;
<span class="author-name" >Chien Cheng-Ting
</span>
;
<span class="author-name" >Chen Guang-Chao ✉
</span>
</div>
</div>
<div class="title"><a href="/gui2/?mode=browse¶ms=publication;34131249" target="_blank">The deubiquitinase Leon/USP5 interacts with Atg1/ULK1 and antagonizes autophagy</a></div> <div> <span class="journal-title">CELL DEATH AND DISEASE</span>
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Paper 540.
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<pre class="comment" style="margin-top: 0; margin-bottom: 0;"><u>Megjegyzés</u>: Funding Agency and Grant Number: Taiwan National Science and Technology Council [MOST111-2311-B-001-018-MY3]; Academia Sinica
Funding text: We thank Jui-Chou Hsu, Thomas Neufeld, the Bloomington Stock Center, Vienna Drosophila RNAi Center, and Fly Core Taiwan for reagents and fly stocks; the National RNAi Core Facility (Academia Sinica, Taiwan) for shRNAs. We thank Hong-Ru Lin for t...</pre>
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A pan-cancer analysis of the role of USP5 in human cancers
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Posttranslational modifications (PTM) such as acetylation, deubiquitination, and phosphorylation of proteins, play important roles in various kinds of cancer progression. Ubiquitin-specific proteinase 5 (USP5), a unique member of deubiquitinating enzymes (DUBs) which recognizes unanchored polyubiquitin specifically, could regulate the stability of many tumorigenesis-associated proteins to influence cancer initiation and progression. However, the diverse biological significance of USP5 in pan-cancer has not been systematically and comprehensively studied. Here, we explored the role of USP5 in pan-cancer using The Cancer Genome Atlas (TCGA) and Genotype-Tissue Expression (GTEx) database, and we also acquired and analyzed data via various software and web platforms such as R, GEPIA2.0, HPA, TISIDB, cBioPortal, UALCAN, TIMER 2.0, CancerSEA and BioGRID. USP5 expression was high in most cancers and differed significantly in different molecular and immune subtypes of cancers. In addition, USP5 had certain diagnostic value in multiple cancers, and high expression of USP5 generally predicted poor prognosis for cancer patients. We also found that the most frequent genetic alterations type of USP5 was mutation, and the DNA methylation level of USP5 decreased in various cancers. Furthermore, USP5 expression correlated with cancer-associated fibroblasts (CAFs), endothelial cells (EC) and genetic markers of immunodulators in cancers. Moreover, the result from single cell sequencing showed that USP5 could regulate several tumor biological behaviors such as apoptosis, DNA damage and metastasis. Gene enrichment analysis indicated "spliceosome" and "RNA splicing" may be the critical mechanism for USP5 to involve in cancer. Taken together, our study elucidates the biological significance of USP5 in the diagnosis, prognosis and immune in human pan-cancer.
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<div class="JournalArticle Publication short-list"> <div class="authors"> <span class="author-name" > Yan, Bokang </span> <span class="author-type"> </span> ; <span class="author-name" > Guo, Jiaxing </span> <span class="author-type"> </span> ; <span class="author-name" > Deng, Shuang </span> <span class="author-type"> </span> ; <span class="author-name" > Chen, Dongliang ✉ </span> <span class="author-type"> </span> ; <span class="author-name" > Huang, Meiyuan ✉ </span> <span class="author-type"> </span> </div ><div class="title"><a href="/gui2/?mode=browse¶ms=publication;34287292" mtid="34287292" target="_blank">A pan-cancer analysis of the role of USP5 in human cancers</a></div> <div class="pub-info"> <span class="journal-title">SCIENTIFIC REPORTS</span> <span class="journal-volume">13</span> : <span class="journal-issue">1</span> <span class="page"> Paper: 8972 , 19 p. </span> <span class="year">(2023)</span> </div> <div class="pub-end"><div class="identifier-list"> <span class="identifiers"> <span class="id identifier oa_none" title="none"> <a style="color:black" title="10.1038/s41598-023-35793-2" target="_blank" href="https://doi.org/10.1038/s41598-023-35793-2"> DOI </a> </span> <span class="id identifier oa_none" title="none"> <a style="color:blue" title="001000613900013" target="_blank" href="https://www.webofscience.com/wos/woscc/full-record/001000613900013"> WoS </a> </span> <span class="id identifier oa_none" title="none"> <a style="color:black" title="85160889592" target="_blank" href="http://www.scopus.com/record/display.url?origin=inward&eid=2-s2.0-85160889592"> Scopus </a> </span> <span class="id identifier oa_none" title="none"> <a style="color:black" title="37268697" target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=37268697&dopt=Abstract"> PubMed </a> </span> </span> </div> <div class="short-pub-prop-list"> <span class="short-pub-mtid"> Közlemény:34287292 </span> <span class="status-holder"><span class="status-data status-VALIDATED"> Egyeztetett </span></span> <span class="pub-core"> Idéző </span> <span class="pub-type">Folyóiratcikk (Szakcikk ) </span> <!-- && !record.category.scientific --> <span class="pub-category">Tudományos</span> </div> </div> </div><div class="JournalArticle Publication long-list">
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<span class="author-name" >Guo Jiaxing
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<span class="author-name" >Deng Shuang
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;
<span class="author-name" >Chen Dongliang ✉
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;
<span class="author-name" >Huang Meiyuan ✉
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<div class="title"><a href="/gui2/?mode=browse¶ms=publication;34287292" target="_blank">A pan-cancer analysis of the role of USP5 in human cancers</a></div> <div> <span class="journal-title">SCIENTIFIC REPORTS</span>
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<span class="journal-volume">13</span> <span class="journal-issue">1</span>
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Paper 8972.
19 p.
</span> <span class="year">(2023)</span>
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<div class="lastModified">Utolsó módosítás: 2023.11.10. 01:54 Szuper Admin (admin)
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School of Life Sciences, Fudan University, Shanghai, 200438, China
Lei Yun Shang Pharmaceutical Group Co.,Ltd., Suzhou, 215009, China
Key Laboratory of Growth Regulation and Translational Research of Zhejiang Province, School of Life Sciences, Westlake University, Hangzhou, 310024, China
Export Date: 25 August 2023
Correspondence Address: Zhao, L.; Key Laboratory of Growth Regulation and Translational Research of Zhejiang Province, China; email: zhaolingrui@westlake.edu.cn
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Zhang, X.
RNAseq analysis of the drug jian-yan-ling (JYL) using both in vivo and in vitro models
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Ethnopharmacological relevance: Jian-yan-ling (JYL) is a drug used in traditional Chinese medicine (TCM) prescriptions for the treatment of tumors after radiotherapy and chemotherapy, to effectively alleviate leukocytopenia. However, the genetic mechanisms underlying the function of JYL remain unclear. Aim of the study: This study aimed to explore the RNA changes and potential biological processes related to the anti-aging or life-extending effects of JYL treatments. Materials and methods: In vivo treatments were performed using Canton-S Drosophila corresponding to three groups: control, low-concentration (low-conc.), and high-concentration (high-conc.) groups. The low-conc. And the high-conc. Groups were treated with 4 mg/mL JYL and 8 mg/mL JYL, respectively. Thirty Drosophila eggs were placed in each vial, and the third instar larvae and adults 7 and 21 days post-eclosion were collected for RNA sequencing, irrespective of the gender. In vitro treatments were conducted using humanized immune cell lines HL60 and Jurkat, which were divided into 3 groups: control (0 μg/mL JYL), low-concentration (40 μg/mL JYL), and high-concentration (80 μg/mL JYL). The cells were collected after 48 h of each JYL drug treatment. Both the Drosophila and cell samples were analyzed using RNA sequencing. Results: The in vivo experiments revealed 74 upregulated genes in the low-concentration group, and CG13078 was a commonly downregulated differential gene, which is involved in ascorbate iron reductase activity. Further analysis of the co-expression map identified the key genes: regulatory particle non-ATPase (RPN), regulatory particle triple-A ATPase (RPT), and tripeptidyl-peptidase II (TPP II). For the in vitro experiments, 19 co-differential genes were compared between different concentrations of the HL 60 cell line, of which three genes were upregulated: LOC107987457 (phostensin-like gene), HSPA1A (heat shock protein family A member 1 A), and H2AC19 (H2A clustered histone 19). In the HL 60 cell line, JYL activated proteasome-related functions. In the Jurkat cell line, there were no common differential genes despite the presence of a dosage-dependent trend. Conclusions: The RNA-seq results showed that the traditional Chinese medicine JYL has longevity and anti-aging effects, indicating that further investigation is required. © 2023 The Authors
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<div class="JournalArticle Publication short-list"> <div class="authors"> <span class="author-name" > Zhang, X. </span> <span class="author-type"> </span> ; <span class="author-name" > Zhai, Y. </span> <span class="author-type"> </span> ; <span class="author-name" > Zhang, D. </span> <span class="author-type"> </span> ; <span class="author-name" > Che, C. </span> <span class="author-type"> </span> ; <span class="author-name" > Zhang, Y. </span> <span class="author-type"> </span> ; <span class="author-name" > Li, Q. </span> <span class="author-type"> </span> ; <span class="author-name" > Zhang, X. </span> <span class="author-type"> </span> ; <span class="author-name" > Zhao, L. ✉ </span> <span class="author-type"> </span> </div ><div class="title"><a href="/gui2/?mode=browse¶ms=publication;34110744" mtid="34110744" target="_blank">RNAseq analysis of the drug jian-yan-ling (JYL) using both in vivo and in vitro models</a></div> <div class="pub-info"> <span class="journal-title">HELIYON</span> <span class="journal-volume">9</span> : <span class="journal-issue">5</span> <span class="page"> Paper: 16143 </span> <span class="year">(2023)</span> </div> <div class="pub-end"><div class="identifier-list"> <span class="identifiers"> <span class="id identifier oa_none" title="none"> <a style="color:blue" title="10.1016/j.heliyon.2023.e16143" target="_blank" href="https://doi.org/10.1016/j.heliyon.2023.e16143"> DOI </a> </span> <span class="id identifier oa_none" title="none"> <a style="color:blue" title="001002105400001" target="_blank" href="https://www.webofscience.com/wos/woscc/full-record/001002105400001"> WoS </a> </span> <span class="id identifier oa_none" title="none"> <a style="color:blue" title="85159584225" target="_blank" href="http://www.scopus.com/record/display.url?origin=inward&eid=2-s2.0-85159584225"> Scopus </a> </span> </span> </div> <div class="short-pub-prop-list"> <span class="short-pub-mtid"> Közlemény:34110744 </span> <span class="status-holder"><span class="status-data status-VALIDATED"> Egyeztetett </span></span> <span class="pub-core"> Idéző </span> <span class="pub-type">Folyóiratcikk (Szakcikk ) </span> <!-- && !record.category.scientific --> <span class="pub-category">Tudományos</span> </div> </div> </div><div class="JournalArticle Publication long-list">
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<pre class="comment" style="margin-top: 0; margin-bottom: 0;"><u>Megjegyzés</u>: School of Life Sciences, Fudan University, Shanghai, 200438, China
Lei Yun Shang Pharmaceutical Group Co.,Ltd., Suzhou, 215009, China
Key Laboratory of Growth Regulation and Translational Research of Zhejiang Province, School of Life Sciences, Westlake University, Hangzhou, 310024, China
Export Date: 25 August 2023 ...</pre>
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Institute of Pathology, Albert Szent-Györgyi Medical School, University of Szeged, 1 Állomás Street, Szeged, 6725, Hungary
Department of Genetics, Faculty of Sciences and Informatics, University of Szeged, 52 Közép fasor, Szeged, 6726, Hungary
Divison of Biology and Biological Engineering, California Institute of Tehnology, 1200 East California Boulevard, Pasadena, 91125, United States
Cited By :2
Export Date: 29 February 2024
Correspondence Address: Pankotai, T.; Institute of Pathology, 1 Állomás Street, Hungary; email: pankotai.tibor@szte.hu
Chemicals/CAS: hydrolase, 9027-41-2; ubiquitin, 60267-61-0; Drosophila Proteins; Hydrolases; Ubiquitin; Ubiquitin-Specific Proteases; USP5 protein, Drosophila
Funding details: Magyar Tudományos Akadémia, MTA, BO/27/20, ÚNKP-20-5-SZTE-265, ÚNKP-21-5-SZTE-563
Funding details: National Research, Development and Innovation Office, GINOP-2.2.1-15-2017-00052, GINOP-2.3.2-15-2016-00032, NKFI-FK 132080
Funding text 1: Open access funding provided by University of Szeged. This research was funded by National Research, Development and Innovation Office Grant GINOP-2.2.1-15-2017-00052, GINOP-2.3.2-15-2016-00032 and NKFI-FK 132080, the János Bolyai Research Scholarship of the Hungarian Academy of Sciences BO/27/20, ÚNKP-20-5-SZTE-265 and ÚNKP-21-5-SZTE-563.
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<pre class="comment" style="margin-top: 0; margin-bottom: 0;"><u>Megjegyzés</u>: Institute of Pathology, Albert Szent-Györgyi Medical School, University of Szeged, 1 Állomás Street, Szeged, 6725, Hungary
Department of Genetics, Faculty of Sciences and Informatics, University of Szeged, 52 Közép fasor, Szeged, 6726, Hungary
Divison of Biology and Biological Engineering, California Institute of Tehnology, 1200 East California Bo...</pre>
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Much remains to be determined about the participation of ubiquitin receptors in proteasomal degradation and their potential as therapeutic targets. Suppression of the ubiquitin receptor S5A/PSMD4/hRpn10 alone stabilises p53/TP53 but not the key p53 repressor MDM2. Here, we observed S5A and the ubiquitin receptors ADRM1/PSMD16/hRpn13 and RAD23A and B functionally overlap in MDM2 degradation. We provide further evidence that degradation of only a subset of ubiquitinated proteins is sensitive to S5A knockdown because ubiquitin receptor redundancy is commonplace. p53 can be upregulated by S5A modulation while degradation of substrates with redundant receptors is maintained. Our observations and analysis of Cancer Dependency Map (DepMap) screens show S5A depletion/loss substantially reduces cancer cell line viability. This and selective S5A dependency of proteasomal substrates make S5A a target of interest for cancer therapy.
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<pre class="comment" style="margin-top: 0; margin-bottom: 0;"><u>Megjegyzés</u>: Export Date: 8 February 2023
CODEN: FEBLA</pre>
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Ageing is driven by a loss of cellular integrity(1). Given the major role of ubiquitin modifications in cell function(2), here we assess the link between ubiquitination and ageing by quantifying whole-proteome ubiquitin signatures in Caenorhabditis elegans. We find a remodelling of the ubiquitinated proteome during ageing, which is ameliorated by longevity paradigms such as dietary restriction and reduced insulin signalling. Notably, ageing causes a global loss of ubiquitination that is triggered by increased deubiquitinase activity. Because ubiquitination can tag proteins for recognition by the proteasome(3), a fundamental question is whether deficits in targeted degradation influence longevity. By integrating data from worms with a defective proteasome, we identify proteasomal targets that accumulate with age owing to decreased ubiquitination and subsequent degradation. Lowering the levels of age-dysregulated proteasome targets prolongs longevity, whereas preventing their degradation shortens lifespan. Among the proteasomal targets, we find the IFB-2 intermediate filament(4) and the EPS-8 modulator of RAC signalling(5). While increased levels of IFB-2 promote the loss of intestinal integrity and bacterial colonization, upregulation of EPS-8 hyperactivates RAC in muscle and neurons, and leads to alterations in the actin cytoskeleton and protein kinase JNK. In summary, age-related changes in targeted degradation of structural and regulatory proteins across tissues determine longevity.
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<div class="JournalArticle Publication short-list"> <div class="authors"> <span class="author-name" > Koyuncu, Seda </span> <span class="author-type"> </span> ; <span class="author-name" > Loureiro, Rute </span> <span class="author-type"> </span> ; <span class="author-name" > Lee, Hyun Ju </span> <span class="author-type"> </span> ; <span class="author-name" > Wagle, Prerana </span> <span class="author-type"> </span> ; <span class="author-name" > Krueger, Marcus </span> <span class="author-type"> </span> ; <span class="author-name" > Vilchez, David ✉ </span> <span class="author-type"> </span> </div ><div class="title"><a href="/gui2/?mode=browse¶ms=publication;32368712" mtid="32368712" target="_blank">Rewiring of the ubiquitinated proteome determines ageing in C. elegans</a></div> <div class="pub-info"> <span class="journal-title">NATURE</span> <span class="journal-volume">596</span> : <span class="journal-issue">7871</span> <span class="page"> pp. 285-+. , 32 p. </span> <span class="year">(2021)</span> </div> <div class="pub-end"><div class="identifier-list"> <span class="identifiers"> <span class="id identifier oa_none" title="none"> <a style="color:black" title="10.1038/s41586-021-03781-z" target="_blank" href="https://doi.org/10.1038%2Fs41586-021-03781-z"> DOI </a> </span> <span class="id identifier oa_none" title="none"> <a style="color:blue" title="000678535100006" target="_blank" href="http://gateway.isiknowledge.com/gateway/Gateway.cgi?&GWVersion=2&SrcAuth=CustomerName&SrcApp=CustomerName&DestLinkType=FullRecord&KeyUT=000678535100006&DestApp=WOS"> WoS </a> </span> <span class="id identifier oa_none" title="none"> <a style="color:black" title="85111621787" target="_blank" href="http://www.scopus.com/record/display.url?origin=inward&eid=2-s2.0-85111621787"> Scopus </a> </span> <span class="id identifier oa_none" title="none"> <a style="color:black" title="34321666" target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=34321666&dopt=Abstract"> PubMed </a> </span> </span> </div> <div class="short-pub-prop-list"> <span class="short-pub-mtid"> Közlemény:32368712 </span> <span class="status-holder"><span class="status-data status-VALIDATED"> Egyeztetett </span></span> <span class="pub-core"> Idéző </span> <span class="pub-type">Folyóiratcikk (Szakcikk ) </span> <!-- && !record.category.scientific --> <span class="pub-category">Tudományos</span> </div> </div> </div><div class="JournalArticle Publication long-list"> <div class="authors"> <img title="Idézőközlemény" style="float: left" src="/frontend/resources/grid/publication-citation-icon.png"> <div class="autype autype0"> <span class="author-name" >Koyuncu Seda </span> ; <span class="author-name" >Loureiro Rute </span> ; <span class="author-name" >Lee Hyun Ju </span> ; <span class="author-name" >Wagle Prerana </span> ; <span class="author-name" >Krueger Marcus </span> ; <span class="author-name" >Vilchez David ✉ </span> </div> </div> <div class="title"><a href="/gui2/?mode=browse¶ms=publication;32368712" target="_blank">Rewiring of the ubiquitinated proteome determines ageing in C. elegans</a></div> <div> <span class="journal-title">NATURE</span> <span class="journal-issn">(<a target="_blank" href="https://portal.issn.org/resource/ISSN/0028-0836">0028-0836</a> <a target="_blank" href="https://portal.issn.org/resource/ISSN/1476-4687">1476-4687</a>)</span>: <span class="journal-volume">596</span> <span class="journal-issue">7871</span> <span class="page"> pp 285-+ </span> <span class="year">(2021)</span> </div> <div class="pub-footer"> <span class="language" xmlns="http://www.w3.org/1999/html">Nyelv: Angol | </span> <span class="identifiers"> <span class="id identifier oa_none" title="none"> <a style="color:black" title="10.1038/s41586-021-03781-z" target="_blank" href="https://doi.org/10.1038%2Fs41586-021-03781-z"> DOI </a> </span> <span class="id identifier oa_none" title="none"> <a style="color:blue" title="000678535100006" target="_blank" href="http://gateway.isiknowledge.com/gateway/Gateway.cgi?&GWVersion=2&SrcAuth=CustomerName&SrcApp=CustomerName&DestLinkType=FullRecord&KeyUT=000678535100006&DestApp=WOS"> WoS </a> </span> <span class="id identifier oa_none" title="none"> <a style="color:black" title="85111621787" target="_blank" href="http://www.scopus.com/record/display.url?origin=inward&eid=2-s2.0-85111621787"> Scopus </a> </span> <span class="id identifier oa_none" title="none"> <a style="color:black" title="34321666" target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=34321666&dopt=Abstract"> PubMed </a> </span> </span> <div class="publication-citation"> <a target="_blank" href="/api/publication?cond=citations.related;eq;32368712&sort=publishedYear,desc&sort=title"> Idézett közlemények száma: 1 </a> </div> <div class="mtid"><span class="long-pub-mtid">Közlemény: 32368712</span> | <span class="status-data status-VALIDATED"> Egyeztetett </span> Idéző | <span class="type-subtype">Folyóiratcikk ( Szakcikk ) </span> | <span class="pub-category">Tudományos</span> | <span class="publication-sourceOfData">WoS-XML</span> </div> <div class="lastModified">Utolsó módosítás: 2021.10.13. 13:29 MTMT API (MTMT API user, admin) </div> </div></div>
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Blount, Jessica R.
Isoleucine 44 Hydrophobic Patch Controls Toxicity of Unanchored, Linear Ubiquitin Chains through NF-kappa B Signaling
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Ubiquitination is a post-translational modification that regulates cellular processes by altering the interactions of proteins to which ubiquitin, a small protein adduct, is conjugated. Ubiquitination yields various products, including mono- and poly-ubiquitinated substrates, as well as unanchored poly-ubiquitin chains whose accumulation is considered toxic. We previously showed that transgenic, unanchored poly-ubiquitin is not problematic inDrosophila melanogaster. In the fruit fly, free chains exist in various lengths and topologies and are degraded by the proteasome; they are also conjugated onto other proteins as one unit, eliminating them from the free ubiquitin chain pool. Here, to further explore the notion of unanchored chain toxicity, we examined when free poly-ubiquitin might become problematic. We found that unanchored chains can be highly toxic if they resemble linear poly-ubiquitin that cannot be modified into other topologies. These species upregulate NF-kappa B signaling, and modulation of the levels of NF-kappa B components reduces toxicity. In additional studies, we show that toxicity from untethered, linear chains is regulated by isoleucine 44, which anchors a key interaction site for ubiquitin. We conclude that free ubiquitin chains can be toxic, but only in uncommon circumstances, such as when the ability of cells to modify and regulate them is markedly restricted.
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<div class="JournalArticle Publication short-list"> <div class="authors"> <span class="author-name" > Blount, Jessica R. </span> <span class="author-type"> </span> ; <span class="author-name" > Libohova, Kozeta </span> <span class="author-type"> </span> ; <span class="author-name" > Silva, Gustavo M. </span> <span class="author-type"> </span> ; <span class="author-name" > Todi, Sokol V ✉ </span> <span class="author-type"> </span> </div ><div class="title"><a href="/gui2/?mode=browse¶ms=publication;31467834" mtid="31467834" target="_blank">Isoleucine 44 Hydrophobic Patch Controls Toxicity of Unanchored, Linear Ubiquitin Chains through NF-kappa B Signaling</a></div> <div class="pub-info"> <span class="journal-title">CELLS</span> <span class="journal-volume">9</span> : <span class="journal-issue">6</span> <span class="page"> Paper: 1519 , 21 p. </span> <span class="year">(2020)</span> </div> <div class="pub-end"><div class="identifier-list"> <span class="identifiers"> <span class="id identifier oa_none" title="none"> <a style="color:blue" title="10.3390/cells9061519" target="_blank" href="https://doi.org/10.3390%2Fcells9061519"> DOI </a> </span> <span class="id identifier oa_none" title="none"> <a style="color:blue" title="000550781700001" target="_blank" href="http://gateway.isiknowledge.com/gateway/Gateway.cgi?&GWVersion=2&SrcAuth=CustomerName&SrcApp=CustomerName&DestLinkType=FullRecord&KeyUT=000550781700001&DestApp=WOS"> WoS </a> </span> <span class="id identifier oa_none" title="none"> <a style="color:black" title="85087100367" target="_blank" href="http://www.scopus.com/record/display.url?origin=inward&eid=2-s2.0-85087100367"> Scopus </a> </span> <span class="id identifier oa_none" title="none"> <a style="color:black" title="32580388" target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=32580388&dopt=Abstract"> PubMed </a> </span> </span> </div> <span class="short-pub-prop-list"> <span class="short-pub-mtid"> Közlemény:31467834 </span> <span class="status-holder"><span class="status-data status-VALIDATED"> Egyeztetett </span></span> <span class="pub-core"> Idéző </span> <span class="pub-type">Folyóiratcikk (Szakcikk ) </span> <!-- && !record.category.scientific --> <span class="pub-category">Tudományos</span> </span> </div> </div><div class="JournalArticle Publication long-list"> <div class="authors"> <img title="Idézőközlemény" style="float: left" src="/frontend/resources/grid/publication-citation-icon.png"> <div class="autype autype0"> <span class="author-name" >Blount Jessica R. </span> ; <span class="author-name" >Libohova Kozeta </span> ; <span class="author-name" >Silva Gustavo M. </span> ; <span class="author-name" >Todi Sokol V ✉ </span> </div> </div> <div class="title"><a href="/gui2/?mode=browse¶ms=publication;31467834" target="_blank">Isoleucine 44 Hydrophobic Patch Controls Toxicity of Unanchored, Linear Ubiquitin Chains through NF-kappa B Signaling</a></div> <div> <span class="journal-title">CELLS</span> <span class="journal-issn">( <a target="_blank" href="https://portal.issn.org/resource/ISSN/2073-4409">2073-4409</a>)</span>: <span class="journal-volume">9</span> <span class="journal-issue">6</span> <span class="page"> Paper 1519. 21 p. </span> <span class="year">(2020)</span> <br> </span> </div> <div class="pub-footer"> <span class="language" xmlns="http://www.w3.org/1999/html">Nyelv: Angol | </span> <span class="identifiers"> <span class="id identifier oa_none" title="none"> <a style="color:blue" title="10.3390/cells9061519" target="_blank" href="https://doi.org/10.3390%2Fcells9061519"> DOI </a> </span> <span class="id identifier oa_none" title="none"> <a style="color:blue" title="000550781700001" target="_blank" href="http://gateway.isiknowledge.com/gateway/Gateway.cgi?&GWVersion=2&SrcAuth=CustomerName&SrcApp=CustomerName&DestLinkType=FullRecord&KeyUT=000550781700001&DestApp=WOS"> WoS </a> </span> <span class="id identifier oa_none" title="none"> <a style="color:black" title="85087100367" target="_blank" href="http://www.scopus.com/record/display.url?origin=inward&eid=2-s2.0-85087100367"> Scopus </a> </span> <span class="id identifier oa_none" title="none"> <a style="color:black" title="32580388" target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=32580388&dopt=Abstract"> PubMed </a> </span> </span> <div class="publication-citation"> <a target="_blank" href="/api/publication?cond=citations.related;eq;31467834&sort=publishedYear,desc&sort=title"> Idézett közlemények száma: 2 </a> </div> <div class="mtid"><span class="long-pub-mtid">Közlemény: 31467834</span> | <span class="status-data status-VALIDATED"> Egyeztetett </span> Idéző | <span class="type-subtype">Folyóiratcikk ( Szakcikk ) </span> | Tudományos </span> | <span class="publication-sourceOfData">WoS-XML</span> </div> <div class="lastModified">Utolsó módosítás: 2020.08.28. 07:16 WoS import (admin) </div> </div></div>
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The small modifier protein, ubiquitin, holds a special place in eukaryotic biology because of its myriad post-translational effects that control normal cellular processes and are implicated in various diseases. By being covalently conjugated onto other proteins, ubiquitin changes their interaction landscape - fostering new interactions as well as inhibiting others - and ultimately deciding the fate of its substrates and controlling pathways that span most cell physiology. Ubiquitin can be attached onto other proteins as a monomer or as a poly-ubiquitin chain of diverse structural topologies. Among the types of poly-ubiquitin species generated are ones detached from another substrate - comprising solely ubiquitin as their constituent - referred to as unanchored, or free chains. Considered to be toxic byproducts, these species have recently emerged to have specific physiological functions in immune pathways and during cell stress. Free chains also do not appear to be detrimental to multi-cellular organisms; they can be active members of the ubiquitination process, rather than corollary species awaiting disassembly into mono-ubiquitin. Here, we summarize past and recent studies on unanchored ubiquitin chains, paying special attention to their emerging roles as second messengers in several signaling pathways. These investigations paint complex and flexible outcomes for free ubiquitin chains, and present a revised model of unanchored poly-ubiquitin biology that is in need of additional investigation.
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Deubiquitylating (DUB) enzymes free covalently linked ubiquitin moieties from ubiquitin-ubiquitin and ubiquitin-protein conjugates, and thereby maintain the equilibrium between free and conjugated ubiquitin moieties and regulate ubiquitin-mediated cellular processes. Here, we performed genetic analyses of mutant phenotypes in Drosophila melanogaster and demonstrate that loss of Usp14 function results in male sterility, with defects in spermatid individualization and reduced testicular free monoubiquitin levels. These phenotypes were rescued by germline-specific overexpression of wild-type Usp14. Synergistic genetic interactions with Ubi-p63E and cycloheximide sensitivity suggest that ubiquitin shortage is a primary cause of male sterility. In addition, Usp14 is predominantly expressed in testes in Drosophila, indicating a higher demand for this DUB in testes that is also reflected by testis-specific loss-of-function Usp14 phenotypes. Collectively, these results suggest a major role of Usp14 in maintaining normal steady state free monoubiquitin levels during the later stages of Drosophila spermatogenesis.This article has an associated First Person interview with the first author of the paper.
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<div class="JournalArticle Publication short-list"> <div class="authors"> <span class="author-name" mtid="10030929"> <a href="/gui2/?type=authors&mode=browse&sel=10030929" target="_blank">Kovács, Levente</a> </span> <span class="author-type"> </span> ; <span class="author-name" mtid="10053160"> <a href="/gui2/?type=authors&mode=browse&sel=10053160" target="_blank">Nagy, Ágota</a> </span> <span class="author-type"> </span> ; <span class="author-name" mtid="10025193"> <a href="/gui2/?type=authors&mode=browse&sel=10025193" target="_blank">Pál, Margit</a> </span> <span class="author-type"> </span> ; <span class="author-name" mtid="10010808"> <a href="/gui2/?type=authors&mode=browse&sel=10010808" target="_blank">Deák, Peter ✉</a> </span> <span class="author-type"> </span> </div ><div class="title"><a href="/gui2/?mode=browse¶ms=publication;31158977" mtid="31158977" target="_blank">Usp14 is required for spermatogenesis and ubiquitin stress responses in Drosophila melanogaster.</a></div> <div class="pub-info"> <span class="journal-title">JOURNAL OF CELL SCIENCE</span> <span class="journal-volume">133</span> : <span class="journal-issue">2</span> <span class="page"> Paper: jcs237511 , 6 p. </span> <span class="year">(2020)</span> </div> <div class="pub-end"><div class="identifier-list"> <span class="identifiers"> <span class="id identifier oa_none" title="none"> <a style="color:blue" title="10.1242/jcs.237511" target="_blank" href="https://doi.org/10.1242/jcs.237511"> DOI </a> </span> <span class="id identifier oa_none" title="none"> <a style="color:blue" title="000512417000013" target="_blank" href="https://www.webofscience.com/wos/woscc/full-record/000512417000013"> WoS </a> </span> <span class="id identifier oa_GREEN" title=" Green "> <a style="color:black" title="119837" target="_blank" href="http://real.mtak.hu/119837"> REAL </a> </span> <span class="id identifier oa_none" title="none"> <a style="color:black" title="85078230617" target="_blank" href="http://www.scopus.com/record/display.url?origin=inward&eid=2-s2.0-85078230617"> Scopus </a> </span> <span class="id identifier oa_none" title="none"> <a style="color:blue" title="31974276" target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=31974276&dopt=Abstract"> PubMed </a> </span> <span class="id identifier oa_GREEN" title=" Green "> <a style="color:blue" title="23416" target="_blank" href="http://publicatio.bibl.u-szeged.hu/23416"> SZTE Publicatio </a> </span> </span> </div> <div class="short-pub-prop-list"> <span class="short-pub-mtid"> Közlemény:31158977 </span> <span class="status-holder"><span class="status-data status-VALIDATED"> Egyeztetett </span></span> <span class="pub-core">Forrás Idéző </span> <span class="pub-type">Folyóiratcikk (Szakcikk ) </span> <!-- && !record.category.scientific --> <span class="pub-category">Tudományos</span> <div class="publication-citation" style="margin-left: 0.5cm;"> <span title="Nyilvános idézőközlemények összesen, említések nélkül" class="citingPub-count">Nyilvános idéző összesen: 4</span> | Független: 3 | Függő: 1 | Nem jelölt: 0 | WoS jelölt: 4 | Scopus jelölt: 1 | WoS/Scopus jelölt: 4 | DOI jelölt: 4 </div> </div> </div> </div><div class="JournalArticle Publication long-list">
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<div class="JournalArticle Publication short-list"> <div class="authors"> <span class="author-name" > Mikuš, Tomislav </span> <span class="author-type"> </span> ; <span class="author-name" > Radeski, Miroslav </span> <span class="author-type"> </span> ; <span class="author-name" > Toma Cziszter, Ludovic </span> <span class="author-type"> </span> ; <span class="author-name" > Dimitrov, Ivan </span> <span class="author-type"> </span> ; <span class="author-name" mtid="10023158"> <a href="/gui2/?type=authors&mode=browse&sel=10023158" target="_blank">Jurkovich, Viktor</a> </span> <span class="author-type"> </span> ; <span class="author-name" > Nenadović, Katarina </span> <span class="author-type"> </span> ; <span class="author-name" > Ostović, Mario </span> <span class="author-type"> </span> ; <span class="author-name" > Zupan, Manja </span> <span class="author-type"> </span> ; <span class="author-name" > Katharina Kirchner, Marlene </span> <span class="author-type"> </span> </div ><div class="title"><a href="/gui2/?mode=browse¶ms=publication;3383871" mtid="3383871" target="_blank">The Danube Region—On Stream with Animal Welfare Assessment in the Last 35 Years: A Review of Research on Animal Welfare Assessment in a Multi-lingual Area in Europe</a></div> <div class="pub-info"> <span class="journal-title">JOURNAL OF AGRICULTURAL & ENVIRONMENTAL ETHICS</span> <span class="journal-volume">31</span> : <span class="journal-issue">4</span> <span class="page"> pp. 511-526. , 16 p. </span> <span class="year">(2018)</span> </div> <div class="pub-end"><div class="identifier-list"> <span class="identifiers"> <span class="id identifier oa_GOLD" title=" Gold "> <a style="color:blue" title="10.1007/s10806-018-9737-4" target="_blank" href="https://doi.org/10.1007/s10806-018-9737-4"> DOI </a> </span> <span class="id identifier oa_none" title="none"> <a style="color:blue" title="000442604500008" target="_blank" href="https://www.webofscience.com/wos/woscc/full-record/000442604500008"> WoS </a> </span> <span class="id identifier oa_none" title="none"> <a style="color:black" title="85048276830" target="_blank" href="http://www.scopus.com/record/display.url?origin=inward&eid=2-s2.0-85048276830"> Scopus </a> </span> </span> </div> <div class="short-pub-prop-list"> <span class="short-pub-mtid"> Közlemény:3383871 </span> <span class="status-holder"><span class="status-data status-ADMIN_APPROVED"> Admin láttamozott </span></span> <span class="pub-core">Forrás Idéző </span> <span class="pub-type">Folyóiratcikk (Összefoglaló cikk ) </span> <!-- && !record.category.scientific --> <span class="pub-category">Tudományos</span> <div class="publication-citation" style="margin-left: 0.5cm;"> <span title="Nyilvános idézőközlemények összesen, említések nélkül" class="citingPub-count">Nyilvános idéző összesen: 4</span> | Független: 2 | Függő: 2 | Nem jelölt: 0 | WoS jelölt: 4 | Scopus jelölt: 2 | WoS/Scopus jelölt: 4 | DOI jelölt: 4 </div> </div> </div> </div><div class="JournalArticle Publication long-list"> <div class="authors"> <img title="Forrásközlemény" style="float: left" src="/frontend/resources/grid/publication-core-icon.png"> <img title="Idézőközlemény" style="float: left" src="/frontend/resources/grid/publication-citation-icon.png"> <div class="autype autype0"> <span class="author-name" >Mikuš Tomislav </span> ; <span class="author-name" >Radeski Miroslav </span> ; <span class="author-name" >Toma Cziszter Ludovic </span> ; <span class="author-name" >Dimitrov Ivan </span> ; <span class="author-name" mtid="10023158"><a href="/gui2/?type=authors&mode=browse&sel=10023158" target="_blank">Jurkovich Viktor (<span class="authorship-author-name">Jurkovich Viktor</span> <span class="authorAux-mtmt"> Állatorvos-tudomány</span>) </a> </span> <span class="author-affil"><span title="Állatorvostudományi Egyetem">ÁTE</span>/Állathigiéniai, állomány-egészségtani és állatorvosi etológiai tanszék</span> ; <span class="author-name" >Nenadović Katarina </span> ; <span class="author-name" >Ostović Mario </span> ; <span class="author-name" >Zupan Manja </span> ; <span class="author-name" >Katharina Kirchner Marlene </span> </div> </div> <div class="title"><a href="/gui2/?mode=browse¶ms=publication;3383871" target="_blank">The Danube Region—On Stream with Animal Welfare Assessment in the Last 35 Years: A Review of Research on Animal Welfare Assessment in a Multi-lingual Area in Europe</a></div> <div> <span class="journal-title">JOURNAL OF AGRICULTURAL & ENVIRONMENTAL ETHICS</span> <span class="journal-issn">(<a target="_blank" href="https://portal.issn.org/resource/ISSN/1187-7863">1187-7863</a> <a target="_blank" href="https://portal.issn.org/resource/ISSN/1573-322X">1573-322X</a>)</span>: <span class="journal-volume">31</span> <span class="journal-issue">4</span> <span class="page"> pp 511-526 </span> <span class="year">(2018)</span> </div> <div class="pub-footer"> <span class="language" xmlns="http://www.w3.org/1999/html">Nyelv: Angol | </span> <span class="identifiers"> <span class="id identifier oa_GOLD" title=" Gold "> <a style="color:blue" title="10.1007/s10806-018-9737-4" target="_blank" href="https://doi.org/10.1007/s10806-018-9737-4"> DOI </a> </span> <span class="id identifier oa_none" title="none"> <a style="color:blue" title="000442604500008" target="_blank" href="https://www.webofscience.com/wos/woscc/full-record/000442604500008"> WoS </a> </span> <span class="id identifier oa_none" title="none"> <a style="color:black" title="85048276830" target="_blank" href="http://www.scopus.com/record/display.url?origin=inward&eid=2-s2.0-85048276830"> Scopus </a> </span> </span> <div class="publication-citation" style="margin-left: 0.5cm;"> <span title="Nyilvános idézőközlemények összesen, említések nélkül" class="citingPub-count">Nyilvános idéző összesen: 4</span> | Független: 2 | Függő: 2 | Nem jelölt: 0 | WoS jelölt: 4 | Scopus jelölt: 2 | WoS/Scopus jelölt: 4 | DOI jelölt: 4 </div> <div class="publication-citation"> <a target="_blank" href="/api/publication?cond=citations.related;eq;3383871&sort=publishedYear,desc&sort=title"> Idézett közlemények száma: 6 </a> </div> <div class="mtid"><span class="long-pub-mtid">Közlemény: 3383871</span> | <span class="status-data status-ADMIN_APPROVED"> Admin láttamozott </span> <span class="oldId">Régi azonosító: 3383871</span> | Forrás Idéző | <span class="type-subtype">Folyóiratcikk ( Összefoglaló cikk ) </span> | <span class="pub-category">Tudományos</span> | <span class="publication-sourceOfData">kézi felvitel</span> </div> <div class="lastModified">Utolsó módosítás: 2019.05.13. 09:38 Bikádi Katalin (Állatorvostud. 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Funding Agency and Grant Number: National Research, Development and Innovation Office [OTKA-K116372, OTKA-PD115404]; Ministry for National Economy of Hungary [GINOP-2.3.2-15-2016-00001, GINOP-2.3.2-15-2016-00032]; Hungarian Academy of Sciences [bo_329_15, LP2017-7/2017]
Funding text: This work was funded by grants from the National Research, Development and Innovation Office (OTKA-K116372 and OTKA-PD115404), Ministry for National Economy of Hungary (GINOP-2.3.2-15-2016-00001 and GINOP-2.3.2-15-2016-00032) and Hungarian Academy of Sciences (Bolyai Fellowship (bo_329_15) and Lendulet Program Grant (LP2017-7/2017)). The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.
Department of Genetics, University of Szeged, Szeged, Hungary
Institute of Biochemistry, Biological Research Centre, Szeged, Hungary
MTA SZBK Lendület Laboratory of Cell Cycle Regulation, Biological Research Centre, Szeged, Hungary
Department of Genetics, University of Cambridge, Cambridge, United Kingdom
Export Date: 11 February 2020
CODEN: POLNC
Correspondence Address: Deák, P.; Department of Genetics, University of SzegedHungary; email: deakp@bio.u-szeged.hu
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<div class="JournalArticle Publication short-list"> <div class="authors"> <span class="author-name" mtid="10053160"> <a href="/gui2/?type=authors&mode=browse&sel=10053160" target="_blank">Nagy, A</a> </span> <span class="author-type"> </span> ; <span class="author-name" mtid="10030929"> <a href="/gui2/?type=authors&mode=browse&sel=10030929" target="_blank">Kovacs, L</a> </span> <span class="author-type"> </span> ; <span class="author-name" mtid="10013846"> <a href="/gui2/?type=authors&mode=browse&sel=10013846" target="_blank">Lipinszki, Z</a> </span> <span class="author-type"> </span> ; <span class="author-name" mtid="10025193"> <a href="/gui2/?type=authors&mode=browse&sel=10025193" target="_blank">Pal, M</a> </span> <span class="author-type"> </span> ; <span class="author-name" mtid="10010808"> <a href="/gui2/?type=authors&mode=browse&sel=10010808" target="_blank">Deak, P ✉</a> </span> <span class="author-type"> </span> </div ><div class="title"><a href="/gui2/?mode=browse¶ms=publication;30343721" mtid="30343721" target="_blank">Developmental- and tissue-specific changes of ubiquitin forms in Drosophila melanogaster</a></div> <div class="pub-info"> <span class="journal-title">PLOS ONE</span> <span class="journal-volume">13</span> : <span class="journal-issue">12</span> <span class="page"> Paper: e0209080 , 10 p. </span> <span class="year">(2018)</span> </div> <div class="pub-end"><div class="identifier-list"> <span class="identifiers"> <span class="id identifier oa_GOLD" title=" Gold "> <a style="color:black" title="10.20944/preprints201806.0431.v1" target="_blank" href="https://doi.org/10.20944/preprints201806.0431.v1"> DOI </a> </span> <span class="id identifier oa_GOLD" title=" Gold "> <a style="color:blue" title="10.1371/journal.pone.0209080" target="_blank" href="https://doi.org/10.1371/journal.pone.0209080"> DOI </a> </span> <span class="id identifier oa_none" title="none"> <a style="color:blue" title="000453247500071" target="_blank" href="https://www.webofscience.com/wos/woscc/full-record/000453247500071"> WoS </a> </span> <span class="id identifier oa_none" title="none"> <a style="color:blue" title="85058487442" target="_blank" href="http://www.scopus.com/record/display.url?origin=inward&eid=2-s2.0-85058487442"> Scopus </a> </span> <span class="id identifier oa_none" title="none"> <a style="color:blue" title="30543682" target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=30543682&dopt=Abstract"> PubMed </a> </span> <span class="id identifier oa_GREEN" title=" Green "> <a style="color:black" title="14274" target="_blank" href="http://publicatio.bibl.u-szeged.hu/14274"> SZTE Publicatio </a> </span> </span> </div> <div class="short-pub-prop-list"> <span class="short-pub-mtid"> Közlemény:30343721 </span> <span class="status-holder"><span class="status-data status-VALIDATED"> Egyeztetett </span></span> <span class="pub-core">Forrás Idéző </span> <span class="pub-type">Folyóiratcikk (Szakcikk ) </span> <!-- && !record.category.scientific --> <span class="pub-category">Tudományos</span> | <span class="pub-error"> Hibás </span> </div> </div> </div><div class="JournalArticle Publication long-list">
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<div class="title"><a href="/gui2/?mode=browse¶ms=publication;30343721" target="_blank">Developmental- and tissue-specific changes of ubiquitin forms in Drosophila melanogaster</a></div> <div> <span class="journal-title">PLOS ONE</span>
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<pre class="comment" style="margin-top: 0; margin-bottom: 0;"><u>Megjegyzés</u>: Funding Agency and Grant Number: National Research, Development and Innovation Office [OTKA-K116372, OTKA-PD115404]; Ministry for National Economy of Hungary [GINOP-2.3.2-15-2016-00001, GINOP-2.3.2-15-2016-00032]; Hungarian Academy of Sciences [bo_329_15, LP2017-7/2017]
Funding text: This work was funded by grants from the National Research, Development and Innovation Office (OTKA-K...</pre>
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<div class="JournalArticle Publication short-list"> <div class="authors"> <span class="author-name" >Ling, Xuemei </span> <span class="author-type"></span> ; <span class="author-name" >Huang, Qinzhu </span> <span class="author-type"></span> ; <span class="author-name" >Xu, Yanqin </span> <span class="author-type"></span> ; <span class="author-name" >Jin, Yuxiao </span> <span class="author-type"></span> ; <span class="author-name" >Feng, Ying </span> <span class="author-type"></span> ; <span class="author-name" >Shi, Weijie </span> <span class="author-type"></span> ; <span class="author-name" >Ye, Xiaolei </span> <span class="author-type"></span> ; <span class="author-name" >Lin, Yi </span> <span class="author-type"></span> ; <span class="author-name" >Hou, Ling </span> <span class="author-type"></span> ; <span class="author-name" >Lin, Xinhua </span> <span class="author-type"></span> </div ><div class="title"><a href="/gui2/?mode=browse¶ms=publication;26535174" mtid="26535174" target="_blank">The deubiquitinating enzyme Usp5 regulates Notch and RTK signaling during Drosophila eye development</a></div> <div class="pub-info"> <span class="journal-title">FEBS LETTERS</span> <span class="journal-volume">591</span> : <span class="journal-issue">6</span> <span class="page"> pp. 875-888. , 14 p.</span> <span class="year">(2017)</span> </div> <div class="pub-end"><div class="identifier-list"> <span class="identifiers"> <span class="id identifier oa_" title=" "> <a style="color: blue" title="10.1002/1873-3468.12580" target="_blank" href="https://doi.org/10.1002%2F1873-3468.12580">DOI</a> </span> <span class="id identifier oa_" title=" "> <a style="color: blue" title="000398003200005" target="_blank" href="http://gateway.isiknowledge.com/gateway/Gateway.cgi?&GWVersion=2&SrcAuth=CustomerName&SrcApp=CustomerName&DestLinkType=FullRecord&KeyUT=000398003200005&DestApp=WOS">WoS</a> </span> <span class="id identifier oa_" title=" "> <a style="color: black" title="85014372809" target="_blank" href="http://www.scopus.com/record/display.url?origin=inward&eid=2-s2.0-85014372809">Scopus</a> </span> </span> </div> <span class="short-pub-prop-list"><span class="short-pub-mtid"> Közlemény:26535174 </span> <span class="status-holder"><span class="status-data status-ADMIN_APPROVED"> Admin láttamozott </span></span> <span class="pub-core"> Idéző </span> <span class="pub-type">Folyóiratcikk (Szakcikk ) </span> <span class="citing-count2">Idézett közlemények száma: 1 </span> </span> </div> </div><div class="JournalArticle Publication long-list">
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<div class="title"><a href="/gui2/?mode=browse¶ms=publication;26535174" target="_blank">The deubiquitinating enzyme Usp5 regulates Notch and RTK signaling during Drosophila eye development</a></div> <div> <span class="journal-title">FEBS LETTERS</span>
<span class="journal-issn">(<a target="_blank" href="https://portal.issn.org/resource/ISSN/0014-5793">0014-5793</a> <a target="_blank" href="https://portal.issn.org/resource/ISSN/1873-3468">1873-3468</a>)</span>:
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<div class="JournalArticle Publication short-list"> <div class="authors"> <span class="author-name" mtid="10010808"> <a href="/gui2/?type=authors&mode=browse&sel=10010808" target="_blank">Deak, P ✉</a> </span> <span class="author-type"> </span> ; <span class="author-name" mtid="10000502"> <a href="/gui2/?type=authors&mode=browse&sel=10000502" target="_blank">Boros, IM</a> </span> <span class="author-type"> </span> </div ><div class="title"><a href="/gui2/?mode=browse¶ms=publication;2961801" mtid="2961801" target="_blank">Ubiquitylation: its role and medical significance</a></div> <div class="pub-info"> <span class="journal-title">ACTA BIOLOGICA SZEGEDIENSIS</span> <span class="journal-volume">59</span> : <span class="journal-issue">Suppl 2</span> <span class="page"> pp. 261-273. , 13 p. </span> <span class="year">(2015)</span> </div> <div class="pub-end"><div class="identifier-list"> <span class="identifiers"> <span class="id identifier oa_RESTRICTED" title=" Korlátozott "> <a style="color:black" title="30245" target="_blank" href="http://real.mtak.hu/30245"> REAL </a> </span> <span class="id identifier oa_GREEN" title=" Green "> <a style="color:blue" title="36043" target="_blank" href="http://acta.bibl.u-szeged.hu/36043"> SZTE Egyetemi kiadványok </a> </span> <span class="id identifier oa_none" title="none"> <a style="color:black" title="84953401025" target="_blank" href="http://www.scopus.com/record/display.url?origin=inward&eid=2-s2.0-84953401025"> Scopus </a> </span> </span> </div> <div class="short-pub-prop-list"> <span class="short-pub-mtid"> Közlemény:2961801 </span> <span class="status-holder"><span class="status-data status-VALIDATED"> Egyeztetett </span></span> <span class="pub-core">Forrás Idéző </span> <span class="pub-type">Folyóiratcikk (Összefoglaló cikk ) </span> <!-- && !record.category.scientific --> <span class="pub-category">Tudományos</span> </div> </div> </div><div class="JournalArticle Publication long-list"> <div class="authors"> <img title="Forrásközlemény" style="float: left" src="/frontend/resources/grid/publication-core-icon.png"> <img title="Idézőközlemény" style="float: left" src="/frontend/resources/grid/publication-citation-icon.png"> <div class="autype autype0"> <span class="author-name" mtid="10010808"><a href="/gui2/?type=authors&mode=browse&sel=10010808" target="_blank">Deak P ✉ (<span class="authorship-author-name">Deák Péter</span> <span class="authorAux-mtmt"> genetika</span>) </a> </span> <span class="author-affil"><span title="Szegedi Tudományegyetem">SZTE</span>/<span title="Természettudományi és Informatikai Kar">TTIK</span>/<span title="Biológus Tanszékcsoport">BTCS</span>/Genetikai Tanszék</span> ; <span class="author-name" mtid="10000502"><a href="/gui2/?type=authors&mode=browse&sel=10000502" target="_blank">Boros IM (<span class="authorship-author-name">Boros Imre Miklós</span> <span class="authorAux-mtmt"> Molekuláris biológia</span>) </a> </span> <span class="author-affil"><span title="Szegedi Tudományegyetem">SZTE</span>/<span title="Természettudományi és Informatikai Kar">TTIK</span>/<span title="Biológus Tanszékcsoport">BTCS</span>/Biokémiai és Molekuláris Biológiai Tanszék</span> </div> </div> <div class="title"><a href="/gui2/?mode=browse¶ms=publication;2961801" target="_blank">Ubiquitylation: its role and medical significance</a></div> <div> <span class="journal-title">ACTA BIOLOGICA SZEGEDIENSIS</span> <span class="journal-issn">(<a target="_blank" href="https://portal.issn.org/resource/ISSN/1588-385X">1588-385X</a> <a target="_blank" href="https://portal.issn.org/resource/ISSN/1588-4082">1588-4082</a>)</span>: <span class="journal-volume">59</span> <span class="journal-issue">Suppl 2</span> <span class="page"> pp 261-273 </span> <span class="year">(2015)</span> </div> <div class="pub-footer"> <span class="language" xmlns="http://www.w3.org/1999/html">Nyelv: Angol | </span> <span class="identifiers"> <span class="id identifier oa_RESTRICTED" title=" Korlátozott "> <a style="color:black" title="30245" target="_blank" href="http://real.mtak.hu/30245"> REAL </a> </span> <span class="id identifier oa_GREEN" title=" Green "> <a style="color:blue" title="36043" target="_blank" href="http://acta.bibl.u-szeged.hu/36043"> SZTE Egyetemi kiadványok </a> </span> <span class="id identifier oa_none" title="none"> <a style="color:black" title="84953401025" target="_blank" href="http://www.scopus.com/record/display.url?origin=inward&eid=2-s2.0-84953401025"> Scopus </a> </span> </span> <div class="publication-citation"> <a target="_blank" href="/api/publication?cond=citations.related;eq;2961801&sort=publishedYear,desc&sort=title"> Idézett közlemények száma: 4 </a> </div> <div class="mtid"><span class="long-pub-mtid">Közlemény: 2961801</span> | <span class="status-data status-VALIDATED"> Egyeztetett </span> <span class="oldId">Régi azonosító: 2961801</span> | Forrás Idéző | <span class="type-subtype">Folyóiratcikk ( Összefoglaló cikk ) </span> | <span class="pub-category">Tudományos</span> | <span class="publication-sourceOfData">kézi felvitel</span> </div> <div class="lastModified">Utolsó módosítás: 2021.09.02. 11:15 Nemesvári Zoltánné (SZTE admin5) </div> </div></div>