@article{MTMT:34787582,
	title = {Responses in the breeding parameters of the collared flycatcher to the changing climate},
	url = {https://m2.mtmt.hu/api/publication/34787582},
	author = {Laczi, Miklós and Sarkadi, Fanni and Herényi, Márton and Nagy, Gergely and Hegyi, Gergely and Jablonszky, Mónika and Könczey, Réka and Krenhardt, Katalin and Markó, Gábor and Rosivall, Balázs and Szász, Eszter and Szöllősi, Eszter and Tóth, László and Zsebők, Sándor and Török, János},
	doi = {10.1016/j.scitotenv.2024.171945},
	journal-iso = {SCI TOTAL ENVIRON},
	journal = {SCIENCE OF THE TOTAL ENVIRONMENT},
	volume = {926},
	unique-id = {34787582},
	issn = {0048-9697},
	year = {2024},
	eissn = {1879-1026},
	orcid-numbers = {Laczi, Miklós/0000-0001-9235-2553; Sarkadi, Fanni/0000-0001-8732-972X; Herényi, Márton/0000-0003-4457-9096; Nagy, Gergely/0000-0002-0943-2876; Hegyi, Gergely/0000-0002-4906-3550; Krenhardt, Katalin/0000-0002-3753-1353; Markó, Gábor/0000-0003-1351-4070; Rosivall, Balázs/0000-0002-0732-1160; Szász, Eszter/0000-0002-9810-2085; Szöllősi, Eszter/0000-0003-2913-2894; Zsebők, Sándor/0000-0003-4463-4753; Török, János/0000-0002-4799-5522}
}

@article{MTMT:34777528,
	title = {New Salicylanilide Derivatives and Their Peptide Conjugates as Anticancer Compounds: Synthesis, Characterization, and In Vitro Effect on Glioblastoma},
	url = {https://m2.mtmt.hu/api/publication/34777528},
	author = {Horváth, Lilla and Biri-Kovács, Beáta and Baranyai, Zsuzsa and Stipsicz, Bence András and Méhes, Előd and Jezsó, Bálint and Krátký, Martin and Vinšová, Jarmila and Bősze, Szilvia},
	doi = {10.1021/acsomega.3c05727},
	journal-iso = {ACS OMEGA},
	journal = {ACS OMEGA},
	unique-id = {34777528},
	issn = {2470-1343},
	year = {2024},
	eissn = {2470-1343},
	orcid-numbers = {Biri-Kovács, Beáta/0000-0001-5803-9969; Méhes, Előd/0000-0003-2697-907X; Jezsó, Bálint/0000-0002-1306-4797}
}

@article{MTMT:34774857,
	title = {Food density drives diet shift of the invasive mysid shrimp, Limnomysis benedeni},
	url = {https://m2.mtmt.hu/api/publication/34774857},
	author = {Rani, Varsha and Horváth, Zsófia and Nejstgaard, Jens C. and Fierpasz, Ádám and Pálffy, Károly and Vad, Csaba Ferenc},
	doi = {10.1002/ece3.11202},
	journal-iso = {ECOL EVOL},
	journal = {ECOLOGY AND EVOLUTION},
	volume = {14},
	unique-id = {34774857},
	issn = {2045-7758},
	abstract = {Understanding the diet preferences and food selection of invasive species is crucial to better predict their impact on community structure and ecosystem functioning. Limnomysis benedeni , a Ponto‐Caspian invasive mysid shrimp, is one of the most successful invaders in numerous European river and lake ecosystems. While existing studies suggest potentially strong trophic impact due to high predation pressure on native plankton communities, little is known of its food selectivity between phyto‐ and zooplankton, under different food concentrations. Here, we therefore investigated the feeding selectivity of L .  benedeni on two commonly occurring prey organisms in freshwaters, the small rotifer zooplankton Brachionus calyciflorus together with the microphytoplankton Cryptomonas sp. present in increasing densities. Our results demonstrated a clear shift in food selection, with L. benedeni switching from B. calyciflorus to Cryptomonas sp. already when the two prey species were provided in equal biomasses. Different functional responses were observed for the two food types, indicating somewhat different foraging mechanisms for each food type. These findings provide experimental evidence on the feeding flexibility of invasive mysid shrimps and potential implications for trophic interactions in invaded ecosystems.},
	year = {2024},
	eissn = {2045-7758},
	orcid-numbers = {Horváth, Zsófia/0000-0003-2857-1094; Nejstgaard, Jens C./0000-0003-1236-0647; Vad, Csaba Ferenc/0000-0003-4744-0698}
}

@article{MTMT:34755849,
	title = {Sleep and local field potential effect of the D2 receptor agonist bromocriptine during the estrus cycle and postpartum period in female rats},
	url = {https://m2.mtmt.hu/api/publication/34755849},
	author = {Tóth, Attila István and Keserű, Dóra and Pethő, Máté and Détári, László and Bencsik, Norbert and Dobolyi, Árpád and Hajnik, Tünde},
	doi = {10.1016/j.pbb.2024.173754},
	journal-iso = {PHARMACOL BIOCHEM BE},
	journal = {PHARMACOLOGY BIOCHEMISTRY AND BEHAVIOR},
	volume = {239},
	unique-id = {34755849},
	issn = {0091-3057},
	year = {2024},
	eissn = {1873-5177},
	orcid-numbers = {Tóth, Attila István/0000-0001-8607-8754; Détári, László/0000-0002-0630-8466; Bencsik, Norbert/0000-0001-9553-3851; Dobolyi, Árpád/0000-0003-0397-2991; Hajnik, Tünde/0000-0003-0684-8136}
}

@article{MTMT:34743931,
	title = {A neural network-based model framework for cell-fate decisions and development},
	url = {https://m2.mtmt.hu/api/publication/34743931},
	author = {Paczkó, Mátyás and Vörös, Dániel and Szabó, Péter and Jékely, Gáspár and Szathmáry, Eörs and Szilágyi, András},
	doi = {10.1038/s42003-024-05985-1},
	journal-iso = {COMMUN BIOL},
	journal = {COMMUNICATIONS BIOLOGY},
	volume = {7},
	unique-id = {34743931},
	abstract = {Gene regulatory networks (GRNs) fulfill the essential function of maintaining the stability of cellular differentiation states by sustaining lineage-specific gene expression, while driving the progression of development. However, accounting for the relative stability of intermediate differentiation stages and their divergent trajectories remains a major challenge for models of developmental biology. Here, we develop an empirical data-based associative GRN model (AGRN) in which regulatory networks store multilineage stage-specific gene expression profiles as associative memory patterns. These networks are capable of responding to multiple instructive signals and, depending on signal timing and identity, can dynamically drive the differentiation of multipotent cells toward different cell state attractors. The AGRN dynamics can thus generate diverse lineage-committed cell populations in a robust yet flexible manner, providing an attractor-based explanation for signal-driven cell fate decisions during differentiation and offering a readily generalizable modelling tool that can be applied to a wide variety of cell specification systems.},
	year = {2024},
	eissn = {2399-3642},
	orcid-numbers = {Paczkó, Mátyás/0000-0002-0162-7927; Vörös, Dániel/0000-0002-6543-3953; Jékely, Gáspár/0000-0001-8496-9836; Szathmáry, Eörs/0000-0001-5227-2997; Szilágyi, András/0000-0002-6894-4652}
}

@article{MTMT:34726766,
	title = {Association between mobile touchscreen devices (MTSDs) and the quality of parent-child interaction in preschoolers},
	url = {https://m2.mtmt.hu/api/publication/34726766},
	author = {Liszkai-Peres, Krisztina and Budai, Zsófia and Adrienn, Kocsis and Jurányi, Zsolt and Pogány, Ákos and Kampis, György and Miklósi, Ádám and Konok, Veronika},
	doi = {10.3389/frcha.2024.1330243},
	journal = {Frontiers in Child and Adolescent Psychiatry},
	volume = {3},
	unique-id = {34726766},
	year = {2024},
	eissn = {2813-4540},
	orcid-numbers = {Liszkai-Peres, Krisztina/0000-0001-9051-9591; Pogány, Ákos/0000-0001-9498-0158; Kampis, György/0000-0001-7373-9402; Miklósi, Ádám/0000-0003-4831-8985; Konok, Veronika/0000-0001-6660-3603}
}

@article{MTMT:34726473,
	title = {Neural evidence for referential understanding of object words in dogs},
	url = {https://m2.mtmt.hu/api/publication/34726473},
	author = {Boros, Marianna and Magyari, Lilla and Morvai, Boglárka and Raúl, Hernandez-Perez and Dror, Shany and Andics, Attila},
	journal-iso = {CURR BIOL},
	journal = {CURRENT BIOLOGY},
	unique-id = {34726473},
	issn = {0960-9822},
	abstract = {Using words to refer to objects in the environment is a core feature of the human language faculty. Referential understanding assumes the formation of mental representations of these words1,2. Such understanding of object words has not yet been demonstrated as a general capacity in any non-human species,3 despite multiple behaviour-based case reports.4–10 In human event-related potential (ERP) studies, object word knowledge is typically tested using the semantic violation paradigm, where words are presented either with their referent (match) or another object (mismatch).11,12 Such mismatch elicits an N400 effect, a well-established neural correlate of semantic processing.12,13 Reports of preverbal infant N400 evoked by semantic violations14 asserts the use of this paradigm to probe mental representations of object words in nonverbal populations. Here, measuring dogs’ (Canis familiaris) ERPs to objects primed with matching or mismatching object words, we found a
		mismatch effect at a frontal electrode, with a latency (206-606 ms) comparable to the human N400. A greater difference for words that dogs knew better, according to owner reports, further supported a semantic interpretation of this effect. Semantic expectations emerged irrespective of vocabulary size, demonstrating the prevalence of referential understanding in dogs. These results provide the first neural evidence for object word knowledge in a non-human animal.},
	keywords = {N400; Comparative cognition; speech-processing; canine (dog)},
	year = {2024},
	eissn = {1879-0445},
	orcid-numbers = {Boros, Marianna/0000-0002-5811-1411; Morvai, Boglárka/0000-0001-6360-9284; Andics, Attila/0000-0002-5913-6100}
}

@misc{MTMT:34718081,
	title = {mulea - an R package for enrichment analysis using multiple ontologies and empirical FDR correction},
	url = {https://m2.mtmt.hu/api/publication/34718081},
	author = {Turek, Cezary and Olbei, Marton and Stirling, Tamás and Fekete, Gergely and Tasnádi, Ervin Áron and Gul, Leila and Bohár, Balázs and Papp, Balázs and Jurkowski, Wiktor and Ari, Eszter},
	unique-id = {34718081},
	abstract = {Traditional gene set enrichment analyses are typically limited to a few ontologies and do not account for the interdependence of gene sets or terms, resulting in overcorrected p-values. To address these challenges, we introduce mulea, an R package offering comprehensive overrepresentation and functional enrichment analysis. mulea employs an innovative empirical false discovery rate (eFDR) correction method, specifically designed for interconnected biological data, to accurately identify significant terms within diverse ontologies. mulea expands beyond traditional tools by incorporating a wide range of ontologies, encompassing Gene Ontology, pathways, regulatory elements, genomic locations, and protein domains. This flexibility enables researchers to tailor enrichment analysis to their specific questions, such as identifying enriched transcriptional regulators in gene expression data or overrepresented protein domains in protein sets. To facilitate seamless analysis, mulea provides gene sets (in standardised GMT format) for 27 model organisms, covering 16 databases and various identifiers resulting in almost 900 files. Additionally, the muleaData ExperimentData Bioconductor package simplifies access to these pre-defined ontologies. Finally, mulea's architecture allows for easy integration of user-defined ontologies, expanding its applicability across diverse research areas. Availability and Implementation: Software for the tools demonstrated in this article is available as an R package on GitHub: https://github.com/ELTEbioinformatics/mulea.},
	year = {2024},
	orcid-numbers = {Stirling, Tamás/0000-0002-8964-6443; Ari, Eszter/0000-0001-7774-1067}
}

@article{MTMT:34714841,
	title = {The reference genome of paradise fish (Macropodus opercularis)},
	url = {https://m2.mtmt.hu/api/publication/34714841},
	author = {Fodor, Erika Gabriella and Javan, Okendo and Nóra, Szabó and Kata, Szabó and Czimer, Dávid Gyula and Anita, Tarján-Rácz and Szeverényi, Ildikó and Bi, Wei Low and Jia, Huan Liew and Sergey, Koren and Arang, Rhie and Orbán, László and Miklósi, Ádám and Varga, Máté and Shawn, M. Burgess},
	journal-iso = {SCI DATA},
	journal = {SCIENTIFIC DATA},
	unique-id = {34714841},
	year = {2024},
	eissn = {2052-4463},
	orcid-numbers = {Orbán, László/0000-0001-5435-5948; Miklósi, Ádám/0000-0003-4831-8985; Varga, Máté/0000-0003-4289-1705}
}

@article{MTMT:34685848,
	title = {Functional contribution of condensate formation by single-stranded DNA binding protein (SSB) to bacterial genome maintenance},
	url = {https://m2.mtmt.hu/api/publication/34685848},
	author = {Ecsédi, Péter and Pálinkás, János and Kovács, Zoltán and Harami, Gábor and Juhasz, Tunde and Jezsó, Bálint and Erfalvy, David and Mahmudova, Lamiya and Házy, Eszter and Beke-Somfai, Tamas and Kovács, Mihály},
	doi = {10.1016/j.bpj.2023.11.547},
	journal-iso = {BIOPHYS J},
	journal = {BIOPHYSICAL JOURNAL},
	volume = {123},
	unique-id = {34685848},
	issn = {0006-3495},
	year = {2024},
	eissn = {1542-0086},
	pages = {79a-80a},
	orcid-numbers = {Ecsédi, Péter/0000-0002-4700-125X; Pálinkás, János/0009-0003-3026-0428; Harami, Gábor/0000-0001-7234-2710; Jezsó, Bálint/0000-0002-1306-4797; Kovács, Mihály/0000-0002-1200-4741}
}