@article{MTMT:33809377, title = {In-depth Temporal Transcriptome Profiling of Monkeypox and Host Cells using Nanopore Sequencing}, url = {https://m2.mtmt.hu/api/publication/33809377}, author = {Kakuk, Balázs and Dörmő, Ákos and Csabai, Zsolt and Kemenesi, Gábor and Holoubek, Jiří and Růžek, Daniel and Prazsák, István and Dani, Virág Éva and Dénes, Béla and Torma, Gábor and Jakab, Ferenc and Tóth, Gábor Endre and Földes, Fanni Vivien and Zana, Brigitta and Lanszki, Zsófia and Harangozó, Ákos and Fülöp, Ádám and Gulyás, Gábor and Mizik, Máté Levente and Kiss, András Attila and Tombácz, Dóra and Boldogkői, Zsolt}, doi = {10.1038/s41597-023-02149-4}, journal-iso = {SCI DATA}, journal = {SCIENTIFIC DATA}, volume = {10}, unique-id = {33809377}, abstract = {The recent human Monkeypox outbreak underlined the importance of studying basic biology of orthopoxviruses. However, the transcriptome of its causative agent has not been investigated before neither with short-, nor with long-read sequencing approaches. This Oxford Nanopore long-read RNA-Sequencing dataset fills this gap. It will enable the in-depth characterization of the transcriptomic architecture of the monkeypox virus, and may even make possible to annotate novel host transcripts. Moreover, our direct cDNA and native RNA sequencing reads will allow the estimation of gene expression changes of both the virus and the host cells during the infection. Overall, our study will lead to a deeper understanding of the alterations caused by the viral infection on a transcriptome level.}, year = {2023}, eissn = {2052-4463}, orcid-numbers = {Kakuk, Balázs/0000-0002-4314-5707; Csabai, Zsolt/0000-0003-0031-0116; Kemenesi, Gábor/0000-0001-9775-3065; Růžek, Daniel/0000-0003-4655-2380; Dani, Virág Éva/0000-0001-9715-2569; Dénes, Béla/0000-0002-9889-529X; Torma, Gábor/0000-0003-3241-0955; Tóth, Gábor Endre/0000-0002-7201-9646; Lanszki, Zsófia/0000-0003-3116-4633; Kiss, András Attila/0000-0003-2633-292X; Tombácz, Dóra/0000-0001-5520-2978; Boldogkői, Zsolt/0000-0003-1184-7293} } @article{MTMT:33713093, title = {Life style and structure differences between species of freshwater fish}, url = {https://m2.mtmt.hu/api/publication/33713093}, author = {Szűts, Viktória and Kelemen-Valkony, Ildikó and Ötvös, Ferenc and Repas, Zoltan and Kovács, András Sándor and Tóth, László and Kiss, András Attila and Lőrincz, Ádám and Szabó, P. Balázs and Gajdán, Krisztina and Kertai, Zoltán and Houshmand, Nazanin and Szutcs, Marcella and Obistioui, Diana and Velciov, Ariana B. and Halasy, Katalin and Deim, Zoltán and Deák, Dalma and Gál, József and Csanádi, József and Racskóné Domonkos, Ildikó}, journal-iso = {MED INT REV}, journal = {MEDICINA INTERNACIA REVUO}, volume = {30}, unique-id = {33713093}, issn = {0465-5435}, year = {2022}, pages = {98-106}, orcid-numbers = {Kiss, András Attila/0000-0003-2633-292X; Deim, Zoltán/0000-0003-3925-5564; Gál, József/0000-0002-4923-7282} } @article{MTMT:32345614, title = {Nanopore Assay Reveals Cell-Type-Dependent Gene Expression of Vesicular Stomatitis Indiana Virus and Differential Host Cell Response}, url = {https://m2.mtmt.hu/api/publication/32345614}, author = {Kakuk, Balázs and Kiss, András Attila and Torma, Gábor and Csabai, Zsolt and Prazsák, István and Mizik, Máté Levente and Megyeri, Klára and Tombácz, Dóra and Boldogkői, Zsolt}, doi = {10.3390/pathogens10091196}, journal-iso = {PATHOGENS}, journal = {PATHOGENS}, volume = {10}, unique-id = {32345614}, year = {2021}, eissn = {2076-0817}, orcid-numbers = {Kakuk, Balázs/0000-0002-4314-5707; Kiss, András Attila/0000-0003-2633-292X; Torma, Gábor/0000-0003-3241-0955; Csabai, Zsolt/0000-0003-0031-0116; Tombácz, Dóra/0000-0001-5520-2978; Boldogkői, Zsolt/0000-0003-1184-7293} } @mastersthesis{MTMT:31391462, title = {Genotype - phenotype relationship in Drosophila type IV collagen mutants [Genotípus – fenotípus kapcsolata Drosophila IV-es típusú kollagén mutánsokban]}, url = {https://m2.mtmt.hu/api/publication/31391462}, author = {Kiss, András Attila}, doi = {10.14232/phd.10542}, publisher = {SZTE}, unique-id = {31391462}, year = {2020}, orcid-numbers = {Kiss, András Attila/0000-0003-2633-292X} } @article{MTMT:30881918, title = {Type IV Collagen Is Essential for Proper Function of Integrin-Mediated Adhesion in Drosophila Muscle Fibers}, url = {https://m2.mtmt.hu/api/publication/30881918}, author = {Kiss, András Attila and Popovics, Nikoletta and Kiss, Márton and Boldogkői, Zsolt and Csiszár, Katalin and Mink, Mátyás}, doi = {10.3390/ijms20205124}, journal-iso = {INT J MOL SCI}, journal = {INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES}, volume = {20}, unique-id = {30881918}, issn = {1661-6596}, year = {2019}, eissn = {1422-0067}, orcid-numbers = {Kiss, András Attila/0000-0003-2633-292X; Boldogkői, Zsolt/0000-0003-1184-7293} } @CONFERENCE{MTMT:30844865, title = {Primary innate immune system activation in temperature-sensitive col4a1 Drosophila melanogaster mutants}, url = {https://m2.mtmt.hu/api/publication/30844865}, author = {Kiss, András Attila and Kiss, Márton and Popovics, Nikoletta and Boldogkői, Zsolt and Mink, Mátyás}, booktitle = {5th International Conference on Model Hosts}, unique-id = {30844865}, abstract = {Primary innate immune system activation in temperature-sensitive col4a1 Drosophila melanogaster mutants}, keywords = {Drosophila melanogaster; extracellular matrix; Basement Membrane/*immunology; Col4a1 mutation}, year = {2019}, pages = {69-69}, orcid-numbers = {Kiss, András Attila/0000-0003-2633-292X; Boldogkői, Zsolt/0000-0003-1184-7293} } @CONFERENCE{MTMT:30686412, title = {Z-disc streaming and incorrect sarcomere assembly in Drosophila col4a1 mutants}, url = {https://m2.mtmt.hu/api/publication/30686412}, author = {Kiss, András Attila and Popovics, Nikoletta and Boldogkői, Zsolt and K., Csiszár and Mink, Mátyás}, booktitle = {TERMIS EU 2019 Tissue Engineering Therapies: From Concept to Clinical Translation & Commercialisation}, unique-id = {30686412}, year = {2019}, pages = {1418-1418}, orcid-numbers = {Kiss, András Attila/0000-0003-2633-292X; Boldogkői, Zsolt/0000-0003-1184-7293} } @article{MTMT:30686350, title = {Novel Phenotypic Elements of Type IV Collagenopathy Revealed by the Drosophila Model}, url = {https://m2.mtmt.hu/api/publication/30686350}, author = {Kiss, András Attila and Popovics, Nikoletta and Tubak, Vilmos and Boldogkői, Zsolt and Csiszár, Katalin and Mink, Mátyás}, doi = {10.3390/app9102083}, journal-iso = {APPL SCI-BASEL}, journal = {APPLIED SCIENCES-BASEL}, volume = {9}, unique-id = {30686350}, year = {2019}, eissn = {2076-3417}, orcid-numbers = {Kiss, András Attila/0000-0003-2633-292X; Tubak, Vilmos/0000-0002-6141-3920; Boldogkői, Zsolt/0000-0003-1184-7293} } @article{MTMT:3326500, title = {4-Hydroxy-2-nonenal Alkylated and Peroxynitrite Nitrated Proteins Localize to the Fused Mitochondria in Malpighian Epithelial Cells of Type IV Collagen Drosophila Mutants}, url = {https://m2.mtmt.hu/api/publication/3326500}, author = {Kiss, András Attila and Popovics, Nikoletta and Boldogkői, Zsolt and Csiszár, Katalin and Mink, Mátyás}, doi = {10.1155/2018/3502401}, journal-iso = {BIOMED RES INT}, journal = {BIOMED RESEARCH INTERNATIONAL}, volume = {2018}, unique-id = {3326500}, issn = {2314-6133}, year = {2018}, eissn = {2314-6141}, orcid-numbers = {Kiss, András Attila/0000-0003-2633-292X; Boldogkői, Zsolt/0000-0003-1184-7293} } @CONFERENCE{MTMT:3241833, title = {Chronic inflammation, oxidative-nitrosative stress, mitochondrial dysfunction, improper integrin expression, loss of sarcomeres and proteolysis of myofibrillar proteins allow diagnosis of muscular dystrophy in Drosophila type IV collagen col4a1 mutants}, url = {https://m2.mtmt.hu/api/publication/3241833}, author = {Kiss, András Attila and Zahorán, Szabolcs and Popovics, Nikoletta and Márton, Kiss and Monika, Radics and Hermesz, Edit and Boldogkői, Zsolt and Katalin, Csiszár and Mink, Mátyás}, booktitle = {6th FEBS Advanced Lecture Course on Matrix Pathobiology, Signaling and Molecular Targets}, unique-id = {3241833}, year = {2017}, pages = {85-85}, orcid-numbers = {Kiss, András Attila/0000-0003-2633-292X; Zahorán, Szabolcs/0000-0002-6649-8249; Hermesz, Edit/0000-0002-0543-6693; Boldogkői, Zsolt/0000-0003-1184-7293} }