TY - JOUR AU - Polcz, Péter AU - Tornai, Kálmán AU - Juhász, János AU - Cserey, György Gábor AU - Surján, György AU - Pándics, Tamás AU - Róka, Eszter AU - Vargha, Márta AU - Reguly, István Zoltán AU - Csikász-Nagy, Attila AU - Pongor, Sándor AU - Szederkényi, Gábor TI - Wastewater-based modeling, reconstruction, and prediction for COVID-19 outbreaks in Hungary caused by highly immune evasive variants JF - WATER RESEARCH J2 - WATER RES VL - 241 PY - 2023 PG - 18 SN - 0043-1354 DO - 10.1016/j.watres.2023.120098 UR - https://m2.mtmt.hu/api/publication/33864634 ID - 33864634 N1 - National Laboratory for Health Security, Faculty of Information Technology and Bionics, Pázmány Péter Catholic University, Práter utca 85, Budapest, H-1083, Hungary Department of Public Health Laboratory, National Public Health Centre, Albert Flórián út 2-6, Budapest, H-1097, Hungary Institute of Medical Microbiology, Semmelweis University, Üllői út 26, Budapest, H-1085, Hungary Department of Digital Health Sciences, Semmelweis University, Üllői út 26, Budapest, H-1085, Hungary Department of Public Health Sciences, Faculty of Health Sciences, Semmelweis University, Vas utca 17, Budapest, H-1088, Hungary Export Date: 28 July 2023 CODEN: WATRA Correspondence Address: Polcz, P.; National Laboratory for Health Security, Práter utca 85, Hungary; email: polcz.peter@itk.ppke.hu LA - English DB - MTMT ER - TY - CHAP AU - Pongor, Sándor AU - Kalcsevszki, Regina AU - Ligeti, Balázs ED - Bánfalvi, Zsófia ED - Gócza, Elen ED - Olasz, Ferenc ED - Pál, Magda ED - Posta, Katalin ED - Várallyay, Éva TI - BIOTECHNOLGY AND BIOINFORMATICS IN THE ERA OF BIG DATA AND ARTIFICIAL INTELLIGENCE T2 - „FIBOK 2022” : Fiatal Biotechnológusok V. Országos Konferenciája PB - MATE Genetika és Biotechnológia Intézet CY - Gödöllő SN - 9789632699998 PY - 2022 SP - 91 UR - https://m2.mtmt.hu/api/publication/33096684 ID - 33096684 LA - English DB - MTMT ER - TY - CHAP AU - Kalcsevszki, Regina AU - Pongor, Sándor AU - Ligeti, Balázs ED - Bánfalvi, Zsófia ED - Gócza, Elen ED - Olasz, Ferenc ED - Pál, Magda ED - Posta, Katalin ED - Várallyay, Éva TI - PREDICTION OF THE CLINICAL OUTCOME OF COVID FROM VIRAL MUTATIONS USING MACHINE LEARNING TECHNIQUES T2 - „FIBOK 2022” : Fiatal Biotechnológusok V. Országos Konferenciája PB - MATE Genetika és Biotechnológia Intézet CY - Gödöllő SN - 9789632699998 PY - 2022 SP - 98 UR - https://m2.mtmt.hu/api/publication/33096681 ID - 33096681 LA - English DB - MTMT ER - TY - JOUR AU - Reguly, István Zoltán AU - Csercsik, Dávid AU - Juhász, János AU - Tornai, Kálmán AU - Bujtár, Zsófia AU - Horváth, Gergely AU - Keömley-Horváth, Bence AU - Kós, Tamás AU - Cserey, György Gábor AU - Iván, Kristóf AU - Pongor, Sándor AU - Szederkényi, Gábor AU - Röst, Gergely AU - Csikász-Nagy, Attila TI - Microsimulation based quantitative analysis of COVID-19 management strategies JF - PLOS COMPUTATIONAL BIOLOGY J2 - PLOS COMPUT BIOL VL - 18 PY - 2022 IS - 1 PG - 14 SN - 1553-734X DO - 10.1371/journal.pcbi.1009693 UR - https://m2.mtmt.hu/api/publication/32574366 ID - 32574366 N1 - Faculty of Information Technology and Bionics, Pázmány Péter Catholic University, Budapest, Hungary Cytocast Kft., Vecses, Hungary Institute of Medical Microbiology, Faculty of Medicine, Semmelweis University, Budapest, Hungary Bolyai Institute, University of Szeged, Szeged, Hungary Randall Centre for Cell and Molecular Biophysics, King’s College London, London, United Kingdom Cited By :1 Export Date: 16 June 2022 Correspondence Address: Reguly, I.Z.; Faculty of Information Technology and Bionics, Hungary; email: reguly.istvan.zoltan@itk.ppke.hu Correspondence Address: Csikász-Nagy, A.; Faculty of Information Technology and Bionics, Hungary; email: csikasz-nagy.attila@itk.ppke.hu LA - English DB - MTMT ER - TY - GEN AU - Kalcsevszki, Regina AU - Ádám, Nagy AU - Balázs, Győrffy AU - Pongor, Sándor AU - Ligeti, Balázs TI - SARS-CoV-2 genetic variants show significant associations with age in Europe PY - 2021 UR - https://m2.mtmt.hu/api/publication/32559943 ID - 32559943 N1 - Poster LA - English DB - MTMT ER - TY - BOOK AU - Juhász, János AU - Ádám, Apagyi AU - Adél, Vincze AU - Noémi, Kis-Német AU - Pongor, Sándor AU - Ligeti, Balázs TI - HMM-based screening for quorum sensing systems in bacterial genomic data PY - 2021 UR - https://m2.mtmt.hu/api/publication/32173883 ID - 32173883 LA - English DB - MTMT ER - TY - JOUR AU - Nagy, Ádám AU - Ligeti, Balázs AU - Szebeni, János AU - Pongor, Sándor AU - Győrffy, Balázs TI - COVIDOUTCOME – Estimating COVID Severity Based on Mutation Signatures in the SARS-CoV-2 Genome JF - DATABASE-JOURNAL OF BIOLOGICAL DATABASES AND CURATION J2 - DATABASE-OXFORD VL - 2021 PY - 2021 PG - 6 SN - 1758-0463 DO - 10.1093/database/baab020 UR - https://m2.mtmt.hu/api/publication/31992378 ID - 31992378 N1 - Funding Agency and Grant Number: Higher Education Institutional Excellence Programme of the Ministry for Innovation and Technology (MIT) in Hungary, within Semmelweis University [2018-2.1.17-TET-KR-00001, 2020-4.1.1.-TKP2020]; OTKA grant (MIT, Hungary) [12065] Funding text: 2018-2.1.17-TET-KR-00001 grant; the Higher Education Institutional Excellence Programme (2020-4.1.1.-TKP2020) of the Ministry for Innovation and Technology (MIT) in Hungary, within the framework of the Bionic thematic programme of the Semmelweis University; OTKA grant 12065 (provided by MIT, Hungary, to Pazmany University). LA - English DB - MTMT ER - TY - JOUR AU - Moreno-Indias, Isabel AU - Lahti, Leo AU - Nedyalkova, Miroslava AU - Elbere, Ilze AU - Roshchupkin, Gennady AU - Adilovic, Muhamed AU - Aydemir, Onder AU - Bakir-Gungor, Burcu AU - Santa Pau, Enrique Carrillo-de AU - D’Elia, Domenica AU - Desai, Mahesh S. AU - Falquet, Laurent AU - Gundogdu, Aycan AU - Hron, Karel AU - Klammsteiner, Thomas AU - Lopes, Marta B. AU - Marcos-Zambrano, Laura Judith AU - Marques, Cláudia AU - Mason, Michael AU - May, Patrick AU - Pašić, Lejla AU - Pio, Gianvito AU - Pongor, Sándor AU - Promponas, Vasilis J. AU - Przymus, Piotr AU - Saez-Rodriguez, Julio AU - Sampri, Alexia AU - Shigdel, Rajesh AU - Stres, Blaz AU - Suharoschi, Ramona AU - Truu, Jaak AU - Truică, Ciprian-Octavian AU - Vilne, Baiba AU - Vlachakis, Dimitrios AU - Yilmaz, Ercument AU - Zeller, Georg AU - Zomer, Aldert L. AU - Gómez-Cabrero, David AU - Claesson, Marcus J. TI - Statistical and Machine Learning Techniques in Human Microbiome Studies: Contemporary Challenges and Solutions JF - FRONTIERS IN MICROBIOLOGY J2 - FRONT MICROBIOL VL - 12 PY - 2021 SN - 1664-302X DO - 10.3389/fmicb.2021.635781 UR - https://m2.mtmt.hu/api/publication/31967038 ID - 31967038 LA - English DB - MTMT ER - TY - JOUR AU - Stercz, Balázs AU - Farkas, Ferenc Balázs AU - Tóth, Ákos AU - Gajdács, Márió AU - Domokos, Judit AU - Horváth, Viola AU - Ostorházi, Eszter AU - Makra, Nóra AU - Kocsis, Béla AU - Juhász, János AU - Ligeti, Balázs AU - Pongor, Sándor AU - Szabó, Dóra TI - The influence of antibiotics on transitory resistome during gut colonization with CTX-M-15 and OXA-162 producing Klebsiella pneumoniae ST15 JF - SCIENTIFIC REPORTS J2 - SCI REP VL - 11 PY - 2021 PG - 10 SN - 2045-2322 DO - 10.1038/s41598-021-85766-6 UR - https://m2.mtmt.hu/api/publication/31921035 ID - 31921035 LA - English DB - MTMT ER - TY - JOUR AU - Juhász, János AU - Ligeti, Balázs AU - Gajdács, Márió AU - Makra, Nóra AU - Ostorházi, Eszter AU - Farkas, Ferenc Balázs AU - Stercz, Balázs AU - Tóth, Ákos AU - Domokos, Judit AU - Pongor, Sándor AU - Szabó, Dóra TI - Colonization Dynamics of Multidrug-Resistant Klebsiella pneumoniae Are Dictated by Microbiota-Cluster Group Behavior over Individual Antibiotic Susceptibility: A Metataxonomic Analysis JF - ANTIBIOTICS J2 - ANTIBIOTICS-BASEL VL - 10 PY - 2021 IS - 3 PG - 21 SN - 2079-6382 DO - 10.3390/antibiotics10030268 UR - https://m2.mtmt.hu/api/publication/31903338 ID - 31903338 N1 - Institute of Medical Microbiology, Faculty of Medicine, Semmelweis University, Nagyvárad tér 4, Budapest, 1089, Hungary Faculty of Information Technology and Bionics, Pázmány Péter Catholic University, Práter utca 50/A, Budapest, 1083, Hungary Department of Pharmacodynamics and Biopharmacy, Faculty of Pharmacy, University of Szeged, Eötvös utca 6, Szeged, 6720, Hungary Department of Bacteriology, Mycology and Parasitology, National Public Health Centre, Albert Flórián út 2-6, Budapest, 1097, Hungary Cited By :4 Export Date: 6 August 2021 Correspondence Address: Szabó, D.; Institute of Medical Microbiology, Nagyvárad tér 4, Hungary; email: szabo.dora@med.semmelweis-univ.hu LA - English DB - MTMT ER -