@article{MTMT:33864634,
	title = {Wastewater-based modeling, reconstruction, and prediction for COVID-19 outbreaks in Hungary caused by highly immune evasive variants},
	url = {https://m2.mtmt.hu/api/publication/33864634},
	author = {Polcz, Péter and Tornai, Kálmán and Juhász, János and Cserey, György Gábor and Surján, György and Pándics, Tamás and Róka, Eszter and Vargha, Márta and Reguly, István Zoltán and Csikász-Nagy, Attila and Pongor, Sándor and Szederkényi, Gábor},
	doi = {10.1016/j.watres.2023.120098},
	journal-iso = {WATER RES},
	journal = {WATER RESEARCH},
	volume = {241},
	unique-id = {33864634},
	issn = {0043-1354},
	year = {2023},
	eissn = {1879-2448},
	orcid-numbers = {Tornai, Kálmán/0000-0003-1852-0816; Surján, György/0000-0001-5836-7647; Reguly, István Zoltán/0000-0002-4385-4204; Csikász-Nagy, Attila/0000-0002-2919-5601; Szederkényi, Gábor/0000-0003-4199-6089}
}

@{MTMT:33096684,
	title = {BIOTECHNOLGY AND BIOINFORMATICS IN THE ERA OF BIG DATA AND ARTIFICIAL INTELLIGENCE},
	url = {https://m2.mtmt.hu/api/publication/33096684},
	author = {Pongor, Sándor and Kalcsevszki, Regina and Ligeti, Balázs},
	booktitle = {„FIBOK 2022” : Fiatal Biotechnológusok V. Országos Konferenciája},
	unique-id = {33096684},
	year = {2022},
	pages = {91}
}

@{MTMT:33096681,
	title = {PREDICTION OF THE CLINICAL OUTCOME OF COVID FROM VIRAL MUTATIONS USING MACHINE LEARNING TECHNIQUES},
	url = {https://m2.mtmt.hu/api/publication/33096681},
	author = {Kalcsevszki, Regina and Pongor, Sándor and Ligeti, Balázs},
	booktitle = {„FIBOK 2022” : Fiatal Biotechnológusok V. Országos Konferenciája},
	unique-id = {33096681},
	year = {2022},
	pages = {98}
}

@article{MTMT:32574366,
	title = {Microsimulation based quantitative analysis of COVID-19 management strategies},
	url = {https://m2.mtmt.hu/api/publication/32574366},
	author = {Reguly, István Zoltán and Csercsik, Dávid and Juhász, János and Tornai, Kálmán and Bujtár, Zsófia and Horváth, Gergely and Keömley-Horváth, Bence and Kós, Tamás and Cserey, György Gábor and Iván, Kristóf and Pongor, Sándor and Szederkényi, Gábor and Röst, Gergely and Csikász-Nagy, Attila},
	doi = {10.1371/journal.pcbi.1009693},
	journal-iso = {PLOS COMPUT BIOL},
	journal = {PLOS COMPUTATIONAL BIOLOGY},
	volume = {18},
	unique-id = {32574366},
	issn = {1553-734X},
	year = {2022},
	eissn = {1553-7358},
	orcid-numbers = {Reguly, István Zoltán/0000-0002-4385-4204; Tornai, Kálmán/0000-0003-1852-0816; Kós, Tamás/0000-0001-5105-4699; Iván, Kristóf/0000-0003-3637-3979; Szederkényi, Gábor/0000-0003-4199-6089; Röst, Gergely/0000-0001-9476-3284; Csikász-Nagy, Attila/0000-0002-2919-5601}
}

@misc{MTMT:32559943,
	title = {SARS-CoV-2 genetic variants show significant associations with age in Europe},
	url = {https://m2.mtmt.hu/api/publication/32559943},
	author = {Kalcsevszki, Regina and Ádám, Nagy and Balázs, Győrffy and Pongor, Sándor and Ligeti, Balázs},
	unique-id = {32559943},
	year = {2021}
}

@misc{MTMT:32173883,
	title = {HMM-based screening for quorum sensing systems in bacterial genomic data},
	url = {https://m2.mtmt.hu/api/publication/32173883},
	author = {Juhász, János and Ádám, Apagyi and Adél, Vincze and Noémi, Kis-Német and Pongor, Sándor and Ligeti, Balázs},
	unique-id = {32173883},
	year = {2021}
}

@article{MTMT:31992378,
	title = {COVIDOUTCOME – Estimating COVID Severity Based on Mutation Signatures in the SARS-CoV-2 Genome},
	url = {https://m2.mtmt.hu/api/publication/31992378},
	author = {Nagy, Ádám and Ligeti, Balázs and Szebeni, János and Pongor, Sándor and Győrffy, Balázs},
	doi = {10.1093/database/baab020},
	journal-iso = {DATABASE-OXFORD},
	journal = {DATABASE-JOURNAL OF BIOLOGICAL DATABASES AND CURATION},
	volume = {2021},
	unique-id = {31992378},
	issn = {1758-0463},
	year = {2021},
	eissn = {1758-0463},
	orcid-numbers = {Nagy, Ádám/0000-0002-7979-7184; Győrffy, Balázs/0000-0002-5772-3766}
}

@article{MTMT:31967038,
	title = {Statistical and Machine Learning Techniques in Human Microbiome Studies: Contemporary Challenges and Solutions},
	url = {https://m2.mtmt.hu/api/publication/31967038},
	author = {Moreno-Indias, Isabel and Lahti, Leo and Nedyalkova, Miroslava and Elbere, Ilze and Roshchupkin, Gennady and Adilovic, Muhamed and Aydemir, Onder and Bakir-Gungor, Burcu and Santa Pau, Enrique Carrillo-de and D’Elia, Domenica and Desai, Mahesh S. and Falquet, Laurent and Gundogdu, Aycan and Hron, Karel and Klammsteiner, Thomas and Lopes, Marta B. and Marcos-Zambrano, Laura Judith and Marques, Cláudia and Mason, Michael and May, Patrick and Pašić, Lejla and Pio, Gianvito and Pongor, Sándor and Promponas, Vasilis J. and Przymus, Piotr and Saez-Rodriguez, Julio and Sampri, Alexia and Shigdel, Rajesh and Stres, Blaz and Suharoschi, Ramona and Truu, Jaak and Truică, Ciprian-Octavian and Vilne, Baiba and Vlachakis, Dimitrios and Yilmaz, Ercument and Zeller, Georg and Zomer, Aldert L. and Gómez-Cabrero, David and Claesson, Marcus J.},
	doi = {10.3389/fmicb.2021.635781},
	journal-iso = {FRONT MICROBIOL},
	journal = {FRONTIERS IN MICROBIOLOGY},
	volume = {12},
	unique-id = {31967038},
	issn = {1664-302X},
	year = {2021},
	eissn = {1664-302X}
}

@article{MTMT:31921035,
	title = {The influence of antibiotics on transitory resistome during gut colonization with CTX-M-15 and OXA-162 producing Klebsiella pneumoniae ST15},
	url = {https://m2.mtmt.hu/api/publication/31921035},
	author = {Stercz, Balázs and Farkas, Ferenc Balázs and Tóth, Ákos and Gajdács, Márió and Domokos, Judit and Horváth, Viola and Ostorházi, Eszter and Makra, Nóra and Kocsis, Béla and Juhász, János and Ligeti, Balázs and Pongor, Sándor and Szabó, Dóra},
	doi = {10.1038/s41598-021-85766-6},
	journal-iso = {SCI REP},
	journal = {SCIENTIFIC REPORTS},
	volume = {11},
	unique-id = {31921035},
	issn = {2045-2322},
	year = {2021},
	eissn = {2045-2322},
	orcid-numbers = {Stercz, Balázs/0000-0002-9585-8397; Gajdács, Márió/0000-0003-1270-0365; Domokos, Judit/0000-0002-0238-105X; Horváth, Viola/0000-0003-1014-7930; Ostorházi, Eszter/0000-0002-9459-7316; Kocsis, Béla/0000-0002-7067-7055; Szabó, Dóra/0000-0002-8601-3923}
}

@article{MTMT:31903338,
	title = {Colonization Dynamics of Multidrug-Resistant Klebsiella pneumoniae Are Dictated by Microbiota-Cluster Group Behavior over Individual Antibiotic Susceptibility: A Metataxonomic Analysis},
	url = {https://m2.mtmt.hu/api/publication/31903338},
	author = {Juhász, János and Ligeti, Balázs and Gajdács, Márió and Makra, Nóra and Ostorházi, Eszter and Farkas, Ferenc Balázs and Stercz, Balázs and Tóth, Ákos and Domokos, Judit and Pongor, Sándor and Szabó, Dóra},
	doi = {10.3390/antibiotics10030268},
	journal-iso = {ANTIBIOTICS-BASEL},
	journal = {ANTIBIOTICS},
	volume = {10},
	unique-id = {31903338},
	year = {2021},
	eissn = {2079-6382},
	orcid-numbers = {Gajdács, Márió/0000-0003-1270-0365; Ostorházi, Eszter/0000-0002-9459-7316; Stercz, Balázs/0000-0002-9585-8397; Domokos, Judit/0000-0002-0238-105X; Szabó, Dóra/0000-0002-8601-3923}
}