@article{MTMT:34751223,
	title = {Role of methylglyoxal and glyoxalase in the regulation of plant response to heavy metal stress},
	url = {https://m2.mtmt.hu/api/publication/34751223},
	author = {Zheng, Qianqian and Xin, Jianpan and Zhao, Chu and Tian, Runan},
	doi = {10.1007/s00299-024-03186-y},
	journal-iso = {PLANT CELL REP},
	journal = {PLANT CELL REPORTS},
	volume = {43},
	unique-id = {34751223},
	issn = {0721-7714},
	year = {2024},
	eissn = {1432-203X},
	orcid-numbers = {Zheng, Qianqian/0009-0005-0604-0016}
}

@article{MTMT:34741611,
	title = {Barley AGO4 proteins show overlapping functionality with distinct small RNA-binding properties in heterologous complementation},
	url = {https://m2.mtmt.hu/api/publication/34741611},
	author = {Miloro, Fabio and Kis, András and Havelda, Zoltán and Dalmadi, Ágnes},
	doi = {10.1007/s00299-024-03177-z},
	journal-iso = {PLANT CELL REP},
	journal = {PLANT CELL REPORTS},
	volume = {43},
	unique-id = {34741611},
	issn = {0721-7714},
	year = {2024},
	eissn = {1432-203X},
	orcid-numbers = {Miloro, Fabio/0000-0002-7637-088X; Kis, András/0000-0002-2212-2397; Havelda, Zoltán/0000-0002-6349-7646; Dalmadi, Ágnes/0000-0002-8070-2752}
}

@article{MTMT:34616258,
	title = {Multi-omics revealed molecular mechanism of biphenyl phytoalexin formation in response to yeast extract-induced oxidative stress in Sorbus aucuparia suspension cells},
	url = {https://m2.mtmt.hu/api/publication/34616258},
	author = {Li, Yuan and Yang, Jian and Zhou, Junhui and Wan, Xiufu and Liu, Juan and Wang, Sheng and Ma, Xiaojing and Guo, Lanping and Luo, Zhiqiang},
	doi = {10.1007/s00299-024-03155-5},
	journal-iso = {PLANT CELL REP},
	journal = {PLANT CELL REPORTS},
	volume = {43},
	unique-id = {34616258},
	issn = {0721-7714},
	abstract = {Pathogen incursions pose a significant threat to crop yield and can have a pronounced effect on agricultural productivity and food security. Biphenyl phytoalexins are a specialized group of secondary metabolites that are mainly biosynthesized by Pyrinae plants as a defense mechanism against various pathogens. Despite previous research demonstrating that biphenyl phytoalexin production increased dramatically in Sorbus aucuparia suspension cells (SASCs) treated with yeast extract (YE), the underlying mechanisms remain poorly understood. To address this gap, we conducted an in-depth, multi-omics analysis of transcriptome, proteome, and metabolite (including biphenyl phytoalexins and phytohormones) dynamics in SASCs exposed to YE. Our results indicated that exposure to YE-induced oxidative stress in SASCs, leading to the biosynthesis of a range of hormones, including jasmonic acid (JA), jasmonic acid isoleucine (JA-ILE), gibberellin A4 (GA4), indole-3-carboxylic acid (ICA), and indole-3-acetic acid (IAA). These hormones activated specific signaling pathways that promoted phenylpropanoid biosynthesis and augmented biphenyl phytoalexin production. Moreover, reactive oxygen species (ROS) generated during this process also acted as signaling molecules, amplifying the phenylpropanoid biosynthesis cascade through activation of the mitogen-activated protein kinase (MAPK) pathway. Key genes involved in these signaling pathways included SaBIS1, SaBIS2, SaBIS3, SaPAL, SaB4H, SaOMT, SaUGT1, SaLOX2, SaPR1, SaCHIB1, SaCHIB2 and SaCHIB3. Collectively, this study provided intensive insights into biphenyl phytoalexin accumulation in YE-treated SASCs, which would inform the development of more efficient disease-resistance strategies in economically significant cultivars.},
	keywords = {Yeast extract; Oxidative stress; plant hormone signaling; Biphenyl phytoalexins; Sorbus aucuparia suspension cells},
	year = {2024},
	eissn = {1432-203X},
	orcid-numbers = {Luo, Zhiqiang/0000-0002-5888-9522}
}

@article{MTMT:34611363,
	title = {Transcriptome analysis reveals the effect of propyl gallate on kiwifruit callus formation},
	url = {https://m2.mtmt.hu/api/publication/34611363},
	author = {Li, Tianyuan and Shen, Tin and Shi, Kai and Zhang, Yunfeng},
	doi = {10.1007/s00299-024-03140-y},
	journal-iso = {PLANT CELL REP},
	journal = {PLANT CELL REPORTS},
	volume = {43},
	unique-id = {34611363},
	issn = {0721-7714},
	abstract = {Key messageExploring the potential action mechanisms of reactive oxygen species during the callus inducing, they can activate specific metabolic pathways in explants to regulate callus development.AbstractReactive oxygen species (ROS) play an important role in the regulation of plant growth and development, but the mechanism of their action on plant callus formation remains to be elucidated. To address this question, kiwifruit was selected as the explant for callus induction, and the influence of ROS on callus formation was investigated by introducing propyl gallate (PG) as an antioxidant into the medium used for inducing callus. The results have unveiled that the inclusion of PG in the medium has disturbed the equilibrium of ROS during the formation of the kiwifruit callus. We selected the callus that was induced by the addition of 0.05 mmol/L PG to the MS medium. The callus exhibited a significant difference in the amount compared to the control medium without PG. The callus induced by the MS medium without PG was used as the control for comparison. KEGG enrichment indicated that PG exposure resulted in significant differences in gene expression in related pathways, such as phytohormone signaling and glutathione in kiwifruit callus. Weighted gene co-expression analysis indicated that the pertinent regulatory networks of both ROS and phytohormone signaling were critical for the establishment of callus in kiwifruit leaves. In addition, during the process of callus establishment, the ROS level of the explants was also closely related to the genes for transmembrane transport of substances, cell wall formation, and plant organ establishment. This investigation expands the theory of ROS-regulated callus formation and presents a new concept for the expeditious propagation of callus in kiwifruit.},
	keywords = {Gene Expression; plant tissue culture; WGCNA; Comparative transcriptome; Signal transduction pathway networks},
	year = {2024},
	eissn = {1432-203X}
}

@article{MTMT:34616259,
	title = {Attenuation of Zucchini mosaic virus disease in cucumber plants by mycorrhizal symbiosis},
	url = {https://m2.mtmt.hu/api/publication/34616259},
	author = {Metwally, Rabab A. and Taha, Mohamed A. and Abd El-Moaty, Nada M. and Abdelhameed, Reda E.},
	doi = {10.1007/s00299-023-03138-y},
	journal-iso = {PLANT CELL REP},
	journal = {PLANT CELL REPORTS},
	volume = {43},
	unique-id = {34616259},
	issn = {0721-7714},
	abstract = {Key message Arbuscular mycorrhizal fungi generated systemic acquired resistance in cucumber to Zucchini yellow mosaic virus, indicating their prospective application in the soil as a sustainable, environmentally friendly approach to inhibit the spread of pathogens. The wide spread of plant pathogens affects the whole world, causing several plant diseases and threatening national food security as it disrupts the quantity and quality of economically important crops. Recently, environmentally acceptable mitigating practices have been required for sustainable agriculture, restricting the use of chemical fertilizers in agricultural areas. Herein, the biological control of Zucchini yellow mosaic virus (ZYMV) in cucumber (Cucumis sativus L.) plants using arbuscular mycorrhizal (AM) fungi was investigated. Compared to control plants, ZYMV-infected plants displayed high disease incidence (DI) and severity (DS) with various symptoms, including severe yellow mosaic, mottling and green blisters of leaves. However, AM fungal inoculation exhibited 50% inhibition for these symptoms and limited DS to 26% as compared to non-colonized ones. The detection of ZYMV by the Enzyme-Linked Immunosorbent Assay technique exhibited a significant reduction in AM-inoculated plants (5.23-fold) compared with non-colonized ones. Besides, mycorrhizal root colonization (F%) was slightly reduced by ZYMV infection. ZYMV infection decreased all growth parameters and pigment fractions and increased the malondialdehyde (MDA) content, however, these parameters were significantly enhanced and the MDA content was decreased by AM fungal colonization. Also, the protein, proline and antioxidant enzymes (POX and CAT) were increased with ZYMV infection with more enhancements due to AM root colonization. Remarkably, defence pathogenesis-related (PR) genes such as PR-a, PR-b, and PR-10 were quickly expressed in response to AM treatment. Our findings demonstrated the beneficial function of AM fungi in triggering the plant defence against ZYMV as they caused systemic acquired resistance in cucumber plants and supported their potential use in the soil as an environment-friendly method of hindering the spread of pathogenic microorganisms sustainably.},
	keywords = {disease severity; PROLINE; Cucumber; Viral infection; mycorrhizal symbiosis; Pathogenesis-related genes},
	year = {2024},
	eissn = {1432-203X}
}

@article{MTMT:34584166,
	title = {Multifactorial analysis of terminator performance on heterologous gene expression in Physcomitrella},
	url = {https://m2.mtmt.hu/api/publication/34584166},
	author = {Niederau, Paul Alexander and Egle, Pauline and Willig, Sandro and Parsons, Juliana and Hoernstein, Sebastian N. W. and Decker, Eva L. and Reski, Ralf},
	doi = {10.1007/s00299-023-03088-5},
	journal-iso = {PLANT CELL REP},
	journal = {PLANT CELL REPORTS},
	volume = {43},
	unique-id = {34584166},
	issn = {0721-7714},
	abstract = {Key messageCharacterization of Physcomitrella 3 ' UTRs across different promoters yields endogenous single and double terminators for usage in molecular pharming.AbstractThe production of recombinant proteins for health applications accounts for a large share of the biopharmaceutical market. While many drugs are produced in microbial and mammalian systems, plants gain more attention as expression hosts to produce eukaryotic proteins. In particular, the good manufacturing practice (GMP)-compliant moss Physcomitrella (Physcomitrium patens) has outstanding features, such as excellent genetic amenability, reproducible bioreactor cultivation, and humanized protein glycosylation patterns. In this study, we selected and characterized novel terminators for their effects on heterologous gene expression. The Physcomitrella genome contains 53,346 unique 3 ' UTRs (untranslated regions) of which 7964 transcripts contain at least one intron. Over 91% of 3 ' UTRs exhibit more than one polyadenylation site, indicating the prevalence of alternative polyadenylation in Physcomitrella. Out of all 3 ' UTRs, 14 terminator candidates were selected and characterized via transient Dual-Luciferase assays, yielding a collection of endogenous terminators performing equally high as established heterologous terminators CaMV35S, AtHSP90, and NOS. High performing candidates were selected for testing as double terminators which impact reporter levels, dependent on terminator identity and positioning. Testing of 3 ' UTRs among the different promoters NOS, CaMV35S, and PpActin5 showed an increase of more than 1000-fold between promoters PpActin5 and NOS, whereas terminators increased reporter levels by less than tenfold, demonstrating the stronger effect promoters play as compared to terminators. Among selected terminator attributes, the number of polyadenylation sites as well as polyadenylation signals were found to influence terminator performance the most. Our results improve the biotechnology platform Physcomitrella and further our understanding of how terminators influence gene expression in plants in general.},
	keywords = {plant biotechnology; moss; UTR; molecular pharming; Physcomitrium},
	year = {2024},
	eissn = {1432-203X},
	orcid-numbers = {Reski, Ralf/0000-0002-5496-6711}
}

@article{MTMT:34559363,
	title = {Agrobacterium-mediated transfer of the Fusarium graminearum Tri6 gene into barley using mature seed-derived shoot tips as explants},
	url = {https://m2.mtmt.hu/api/publication/34559363},
	author = {Gao, Dongying and Abdullah, Sidrat and Baldwin, Thomas and Caspersen, Ann and Williams, Edward and Carlson, Alvar and Petersen, Mike and Hu, Gongshe and Klos, Kathy Esvelt and Bregitzer, Phil},
	doi = {10.1007/s00299-023-03129-z},
	journal-iso = {PLANT CELL REP},
	journal = {PLANT CELL REPORTS},
	volume = {43},
	unique-id = {34559363},
	issn = {0721-7714},
	abstract = {Despite its agronomic and economic importance, barley transformation is still very challenging for many elite varieties. In this study, we used direct shoot organogenesis to transform the elite barley cultivar GemCraft with the RNAi constructs containing Tri6 gene of Fusarium graminearum, which causes fusarium head blight (FHB). We isolated 4432 shoot tips and co-cultured these explants with Agrobacterium tumefaciens. A total of 25 independent T0 transgenic plants were generated including 15 events for which transgene-specific PCR amplicons were observed. To further determine the presence of transgenes, the T1 progenies of all 15 T0 plants were analyzed, and the expected PCR products were obtained in 10 T1 lines. Droplet digital (dd) PCR analysis revealed various copy numbers of transgenes in the transgenic plants. We determined the insertion site of transgenes using long-read sequencing data and observed the rearrangements of transgenes. We found phenotypic variations in both T1 and T2 generation plants. FHB disease was evaluated under growth chamber conditions, but no significant differences in disease severity or deoxynivalenol accumulation were observed between two Tri6 transgenic lines and the wildtype. Our results demonstrate the feasibility of the shoot tip transformation and may open the door for applying this system for genetic improvement and gene function research in other barley genotypes.},
	keywords = {BARLEY; RNA Interference; somatic variation; Shoot tip transformation; Tri6},
	year = {2024},
	eissn = {1432-203X}
}

@article{MTMT:34658353,
	title = {The positive impact of the NtTAS14-like1 gene on osmotic stress response in Nicotiana tabacum},
	url = {https://m2.mtmt.hu/api/publication/34658353},
	author = {Hu, Zhengrong and Li, Yangyang and Yang, Jiashuo and Song, Shurui and Li, Xiaoxu and Xiong, Chengliang and Yi, Pengfei and Liu, Canhui and Hu, Risheng and Huang, Xuebing},
	doi = {10.1007/s00299-023-03118-2},
	journal-iso = {PLANT CELL REP},
	journal = {PLANT CELL REPORTS},
	volume = {43},
	unique-id = {34658353},
	issn = {0721-7714},
	keywords = {Nicotiana tabacum; gene function; Osmotic stress; Dehydrin proteins; TAS14},
	year = {2024},
	eissn = {1432-203X}
}

@article{MTMT:34514423,
	title = {Plants and global warming: challenges and strategies for a warming world},
	url = {https://m2.mtmt.hu/api/publication/34514423},
	author = {Seth, Pratyay and Sebastian, Jose},
	doi = {10.1007/s00299-023-03083-w},
	journal-iso = {PLANT CELL REP},
	journal = {PLANT CELL REPORTS},
	volume = {43},
	unique-id = {34514423},
	issn = {0721-7714},
	year = {2024},
	eissn = {1432-203X},
	pages = {27}
}

@article{MTMT:34510735,
	title = {Modulation of carotenoid biosynthesis in maize (Zea mays L.) seedlings by exogenous abscisic acid and salicylic acid under low temperature},
	url = {https://m2.mtmt.hu/api/publication/34510735},
	author = {Xiang, N. and Zhang, B. and Hu, J. and Li, K. and Guo, X.},
	doi = {10.1007/s00299-023-03106-6},
	journal-iso = {PLANT CELL REP},
	journal = {PLANT CELL REPORTS},
	volume = {43},
	unique-id = {34510735},
	issn = {0721-7714},
	year = {2024},
	eissn = {1432-203X}
}