https://m2.mtmt.hu/ hun 2026-09-21 06:47 JournalArticle 36234284 VALIDATED true 0 false 2026-09-04T09:57:29.301+0000 2026-02-04T11:25:43.635+0000 2025-07-07T20:45:01.667+0000 true 10024570 Turiák Lilla /api/author/10024570 Author true 10024570 2026-07-21T12:15:26.594+0000 2025-12-02T08:33:44.844+0000 true 10073049 Sóki Edina /api/admin/10073049 Admin true Admin 10063514 /api/admin/10063514 Mikola Katalin true 10063514 true 2026-01-21T13:12:53.998+0000 true false true 24 24 /api/publicationtype/24 PublicationType 1 true 24 JournalArticle true 10000059 Article true 24 24 /api/publicationtype/24 PublicationType 1 true 24 JournalArticle /api/subtype/10000059 Szakcikk SubType 101 true 10000059 true 1 /api/category/1 Category true 1 Bugyi, Fanni Unveiling unique protein and phosphorylation signatures in lung adenocarcinomas with and without ALK, EGFR, and KRAS genetic alterations true true /api/journal/10011733 REVIEWED true false 10011733 false 10011733 true 1574-7891 1878-0261 Journal FOREIGN 19 11 3243 3265 3243 23 2025 Genetic alterations in key oncogenes have been frequently identified in lung adenocarcinoma (LUAD), including genes encoding epidermal growth factor receptor ( EGFR ), Kirsten rat sarcoma viral oncogene homolog ( KRAS ), and anaplastic lymphoma kinase ( ALK ). In this pilot study, we aimed to characterize the differences in enriched biological pathways and phosphorylation events between LUAD tumors harboring EGFR , KRAS , or echinoderm microtubule‐associated protein‐like 4 ( EML4 )– ALK oncogenic alterations and triple wild‐type LUAD tumors (WT, without EML4–ALK , KRAS , or EGFR alterations) by mass spectrometry (MS)‐based quantitative proteomics and phosphoproteomics. We analyzed tumor regions of 82 formalin‐fixed paraffin‐embedded (FFPE) tissue sections with 6, 23, 31, and 22 samples from the EML4–ALK , EGFR , KRAS , and WT sample groups, respectively. A total of 1377 to 2189 proteins and 73 to 1781 phosphosites were quantified in these analyses. Based on the results, the samples clustered according to their genetic alteration type, and EGFR ‐mutated samples showed unique protein expression patterns. Membrane organization, vesicle organization, and vesicle‐mediated transport Gene Ontology Biological Process (GOBP) terms were significantly downregulated in EGFR ‐mutated samples compared to the other sample groups. Changes in 36 proteins and 52 phosphosites were also identified as potentially specific to a given genetic alteration. Many of these proteins have previously been linked to EGFR or KRAS mutations [e.g., cathepsin L, stimulator of interferon genes protein (STING)], whereas several phosphoproteins are associated with RNA splicing [e.g., serine/arginine‐rich splicing factor 1 (SRSF1), SRSF2, and SRSF7 proteins]. Kinase–substrate enrichment analysis indicated altered activities of 10 kinases, including mitogen‐activated protein kinases (MAPKs) and cyclin‐dependent kinases (CDKs). For example, CDK2 activity was elevated in EML4–ALK samples compared to the other sample groups. Our results could provide significant insights into further studies that could contribute to developing improved diagnostic and therapeutic strategies for LUAD. 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/api/authorship/127170733 2 0.077 false false false Author 10081651 /api/author/10081651 Balbisi Mirjam true true Balbisi Mirjam true false false AuthorshipType 1 /api/authorshiptype/1 0 true 0 true false true PersonAuthorship 127170734 /api/authorship/127170734 3 0.07692308 false false false Sugár Simon true false false AuthorshipType 1 /api/authorshiptype/1 0 true 0 true false true PersonAuthorship 127170735 /api/authorship/127170735 4 0.077 false false false Author 10072608 /api/author/10072608 Váncza Lóránd true true Váncza Lóránd true false false AuthorshipType 1 /api/authorshiptype/1 0 true 0 true false true PersonAuthorship 127170736 /api/authorship/127170736 5 0.077 false false false Author 10052245 /api/author/10052245 Regős Eszter true 10052245 true Regős Eszter true false false AuthorshipType 1 /api/authorshiptype/1 0 true 0 true false true PersonAuthorship 127170737 /api/authorship/127170737 6 0.077 false false false Author 10009505 /api/author/10009505 Kovalszky Ilona true 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/api/authorship/127170742 11 0.077 false false false Author 10003072 /api/author/10003072 Moldvay Judit true 10003072 true Moldvay Judit true false false AuthorshipType 1 /api/authorshiptype/1 0 true 0 true false true PersonAuthorship 127170743 /api/authorship/127170743 12 0.07692308 false false false Author 10002323 /api/author/10002323 Drahos László true 10002323 true Drahos László true false false AuthorshipType 1 /api/authorshiptype/1 0 true 0 true false true PersonAuthorship 127170744 /api/authorship/127170744 13 0.077 false true true Author 10024570 /api/author/10024570 Turiák Lilla true 10024570 true Turiák Lilla true false false AuthorshipType 1 /api/authorshiptype/1 0 true 0 true false true PublicationIdentifier 29570203 /api/publicationidentifier/29570203 PlainSource 6 /api/publicationsource/6 PublicationSourceType 10001 /api/publicationsourcetype/10001 true true true DOI DOI https://doi.org/@@@ true true 6 true GOLD true IDENTICAL 10.1002/1878-0261.70091 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title="Idézőközlemény" style="float: left" src="/frontend/resources/grid/publication-citation-icon.png"> <div class="autype autype0"> <span class="author-name" mtid="10078416"><a href="/gui2/?type=authors&mode=browse&sel=10078416" target="_blank">Bugyi Fanni (<span class="authorship-author-name">Bugyi Fanni</span> <span class="authorAux-mtmt"> MS Proteomika</span>) </a> </span> <span class="author-affil"><span title="Eötvös Loránd Tudományegyetem">ELTE</span>/<span title="Természettudományi Kar">TTK</span>/Hevesy György Kémia Doktori Iskola</span> ;&nbsp;&nbsp;&nbsp; <span class="author-name" mtid="10081651"><a href="/gui2/?type=authors&mode=browse&sel=10081651" target="_blank">Balbisi Mirjam (<span class="authorship-author-name">Balbisi Mirjam</span> <span class="authorAux-mtmt"> Kémia</span>) </a> </span> <span class="author-affil"><span title="Semmelweis Egyetem">SE</span>/Doktori Iskola; <span title="HUN-REN Természettudományi Kutatóközpont">HRN TTK</span>/Szerves Kémiai Intézet</span> ;&nbsp;&nbsp;&nbsp; <span class="author-name" >Sugár Simon </span> ;&nbsp;&nbsp;&nbsp; <span class="author-name" mtid="10072608"><a href="/gui2/?type=authors&mode=browse&sel=10072608" target="_blank">Váncza Lóránd (<span class="authorship-author-name">Váncza Lóránd</span> <span class="authorAux-mtmt"> Onkológia</span>) </a> </span> <span class="author-affil"><span title="Semmelweis Egyetem">SE</span>/<span title="Általános Orvostudományi Kar">AOK</span>/<span title="Intézet">I</span>/Patológiai és Kísérleti Rákkutató Intézet</span> ;&nbsp;&nbsp;&nbsp; <span class="author-name" mtid="10052245"><a href="/gui2/?type=authors&mode=browse&sel=10052245" target="_blank">Regős Eszter (<span class="authorship-author-name">Regős Eszter</span> <span class="authorAux-mtmt"> Molekuláris biológia</span>) </a> </span> <span class="author-affil"><span title="Semmelweis Egyetem">SE</span>/<span title="Általános Orvostudományi Kar">AOK</span>/<span title="Intézet">I</span>/Patológiai és Kísérleti Rákkutató Intézet</span> ;&nbsp;&nbsp;&nbsp; <span class="author-name" mtid="10009505"><a href="/gui2/?type=authors&mode=browse&sel=10009505" target="_blank">Kovalszky Ilona (<span class="authorship-author-name">Kovalszky Ilona</span> <span class="authorAux-mtmt"> Onkológia</span>) </a> </span> <span class="author-affil"><span title="Semmelweis Egyetem">SE</span>/<span title="Általános Orvostudományi Kar">AOK</span>/<span title="Intézet">I</span>/Patológiai és Kísérleti Rákkutató Intézet</span> ;&nbsp;&nbsp;&nbsp; <span class="author-name" >Laczó Ibolya </span> ;&nbsp;&nbsp;&nbsp; <span class="author-name" >Harkó Tünde </span> ;&nbsp;&nbsp;&nbsp; <span class="author-name" mtid="10063503"><a href="/gui2/?type=authors&mode=browse&sel=10063503" target="_blank">Kecskeméti Gábor (<span class="authorship-author-name">Kecskeméti Gábor</span> <span class="authorAux-mtmt"> Analitika</span>) </a> </span> <span class="author-affil"><span title="Szegedi Tudományegyetem">SZTE</span>/<span title="Szent-Györgyi Albert Orvostudományi Kar">SZAOK</span>/Orvosi Vegytani Intézet</span> ;&nbsp;&nbsp;&nbsp; <span class="author-name" mtid="10027486"><a href="/gui2/?type=authors&mode=browse&sel=10027486" target="_blank">Szabó Zoltán (<span class="authorship-author-name">Szabó Zoltán</span> <span class="authorAux-mtmt"> proteomika</span>) </a> </span> <span class="author-affil"><span title="Szegedi Tudományegyetem">SZTE</span>/<span title="Szent-Györgyi Albert Orvostudományi Kar">SZAOK</span>/Orvosi Vegytani Intézet</span> ;&nbsp;&nbsp;&nbsp; <span class="author-name" mtid="10003072"><a href="/gui2/?type=authors&mode=browse&sel=10003072" target="_blank">Moldvay Judit (<span class="authorship-author-name">Moldvay Judit</span> <span class="authorAux-mtmt"> Tüdõgyógyászat</span>) </a> </span> <span class="author-affil"><span title="Szegedi Tudományegyetem">SZTE</span>/<span title="Szent-Györgyi Albert Orvostudományi Kar">SZAOK</span>/Tüdőgyógyászati Klinika</span> ;&nbsp;&nbsp;&nbsp; <span class="author-name" mtid="10002323"><a href="/gui2/?type=authors&mode=browse&sel=10002323" target="_blank">Drahos László (<span class="authorship-author-name">Drahos László</span> <span class="authorAux-mtmt"> proteomika, tömegspektrometria</span>) </a> </span> <span class="author-affil"><span title="HUN-REN Természettudományi Kutatóközpont">HRN TTK</span>/Szerves Kémiai Intézet</span> ;&nbsp;&nbsp;&nbsp; <span class="author-name" mtid="10024570"><a href="/gui2/?type=authors&mode=browse&sel=10024570" target="_blank">Turiák Lilla ✉ (<span class="authorship-author-name">Turiák Lilla</span> <span class="authorAux-mtmt"> tömegspektrometria, proteomika</span>) </a> </span> <span class="author-affil"><span title="HUN-REN Természettudományi Kutatóközpont">HRN TTK</span>/Szerves Kémiai Intézet</span> </div> </div> <div class="title"><a href="/gui2/?mode=browse&params=publication;36234284" target="_blank">Unveiling unique protein and phosphorylation signatures in lung adenocarcinomas with and without ALK, EGFR, and KRAS genetic alterations</a></div> <div> <span class="journal-title">MOLECULAR ONCOLOGY</span> <span class="journal-issn">(<a target="_blank" href="https://portal.issn.org/resource/ISSN/1574-7891">1574-7891</a> <a target="_blank" href="https://portal.issn.org/resource/ISSN/1878-0261">1878-0261</a>)</span>: <span class="journal-volume">19</span> <span class="journal-issue">11</span> <span class="page"> pp 3243-3265 </span> <span class="year">(2025)</span> </div> <div class="pub-footer"> <span class="language" xmlns="http://www.w3.org/1999/html">Nyelv: Angol | </span> <span class="identifiers"> <span class="id identifier oa_GOLD" title=" Gold "> <a style="color:blue" title="10.1002/1878-0261.70091" target="_blank" href="https://doi.org/10.1002/1878-0261.70091"> DOI </a> </span> <span class="id identifier oa_none" title="none"> <a style="color:blue" title="001523730000001" target="_blank" href="https://www.webofscience.com/wos/woscc/full-record/001523730000001"> WoS </a> </span> <span class="id identifier oa_none" title="none"> <a style="color:blue" title="105009831860" target="_blank" href="http://www.scopus.com/record/display.url?origin=inward&eid=2-s2.0-105009831860"> Scopus </a> </span> <span class="id identifier oa_none" title="none"> <a style="color:blue" title="40621945" target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=40621945&dopt=Abstract"> PubMed </a> </span> <span class="id identifier oa_NONE" title=" Nincs "> <a style="color:blue" title="https://www.scopus.com/inward/record.uri?eid=2-s2.0-105009831860&doi=10.1002%2F1878-0261.70091&partnerID=40&md5=9f09ad09e6571ce9cd86108ad3193178" target="_blank" href="https://www.scopus.com/inward/record.uri?eid=2-s2.0-105009831860&doi=10.1002%2F1878-0261.70091&partnerID=40&md5=9f09ad09e6571ce9cd86108ad3193178"> Egyéb URL </a> </span> <span class="id identifier oa_GREEN" title=" Green "> <a style="color:blue" title="38885" target="_blank" href="http://publicatio.bibl.u-szeged.hu/38885"> SZTE Publicatio </a> </span> </span> <OnlyViewableByAuthor><div class="ratings"> <div class="journal-subject">Folyóirat szakterülete: Scopus - Medicine (miscellaneous)&nbsp;&nbsp;&nbsp;SJR indikátor:&nbsp;D1</div> <div class="journal-subject">Folyóirat szakterülete: Scopus - Genetics&nbsp;&nbsp;&nbsp;SJR indikátor:&nbsp;Q1</div> <div class="journal-subject">Folyóirat szakterülete: Scopus - Molecular Medicine&nbsp;&nbsp;&nbsp;SJR indikátor:&nbsp;Q1</div> <div class="journal-subject">Folyóirat szakterülete: Scopus - Oncology&nbsp;&nbsp;&nbsp;SJR indikátor:&nbsp;Q1</div> <div class="journal-subject">Folyóirat szakterülete: Scopus - Cancer Research&nbsp;&nbsp;&nbsp;SJR indikátor:&nbsp;Q2</div> </div></OnlyViewableByAuthor> <div class="publication-citation"> <a target="_blank" href="/api/publication?cond=citations.related;eq;36234284&sort=publishedYear,desc&sort=title"> Idézett közlemények száma: 7 </a> </div> <div class="mtid"><span class="long-pub-mtid">Közlemény: 36234284</span> | <span class="status-data status-VALIDATED"> Egyeztetett </span> Forrás Idéző | <span class="type-subtype">Folyóiratcikk ( Szakcikk ) </span> | <span class="pub-category">Tudományos</span> | <span class="publication-sourceOfData">WOS TAGGED</span> </div> <div class="funder"> (2018-1.2.1-NKP-2018-00005) Támogató: NKFIH, (FK131603), (K147226) </div> <div class="lastModified">Utolsó módosítás: 2026.02.04. 12:25 Mikola Katalin (MTMT 3, admin) </div> <div class="lockedBy">Központi kezelésű 2026.01.21. 14:12 Mikola Katalin (MTMT 3, admin) </div> </div></div>