Kémia az életminőség javításáért: stratégiai K+F műhely a Debreceni Egyetemen(GINOP-2.3.2-15-2016-00008)
(European Regional Development Fund(GINOP-2.3.3-15-2016-00004))
Szakterületek:
Kémiai tudományok
Shank proteins are among the most abundant and well-studied postsynaptic scaffold
proteins. Their PDZ domain has unique characteristics as one of its loop regions flanking
the ligand-binding site is uniquely long and has also been implicated in the formation
of PDZ dimers. Here we report the initial characterization of the Shank1 PDZ domain
by solution NMR spectroscopy. The assigned chemical shifts are largely consistent
with the common features of PDZ domains in general and the available Shank PDZ crystal
structures in particular. Our analysis suggests that under the conditions investigated,
the domain is monomeric and the unique loop harbors a short helical segment, observed
in only one of the known X-ray structures so far. Our work stresses the importance
of solution-state investigations to fully decipher the functional relevance of the
structural and dynamical features unique to Shank PDZ domains.